ID W2ZJN3_PHYPR Unreviewed; 438 AA.
AC W2ZJN3;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 22-FEB-2023, entry version 36.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=F442_06520 {ECO:0000313|EMBL:ETP47498.1};
OS Phytophthora parasitica P10297.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=1317064 {ECO:0000313|EMBL:ETP47498.1, ECO:0000313|Proteomes:UP000018948};
RN [1] {ECO:0000313|EMBL:ETP47498.1, ECO:0000313|Proteomes:UP000018948}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=P10297 {ECO:0000313|EMBL:ETP47498.1,
RC ECO:0000313|Proteomes:UP000018948};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Walker B., Young S.K., Zeng Q., Gargeya S.,
RA Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Phytophthora parasitica P10297.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETP47498.1}.
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DR EMBL; ANIY01001380; ETP47495.1; -; Genomic_DNA.
DR EMBL; ANIY01001380; ETP47496.1; -; Genomic_DNA.
DR EMBL; ANIY01001380; ETP47497.1; -; Genomic_DNA.
DR EMBL; ANIY01001380; ETP47498.1; -; Genomic_DNA.
DR AlphaFoldDB; W2ZJN3; -.
DR EnsemblProtists; ETP47495; ETP47495; F442_06520.
DR EnsemblProtists; ETP47496; ETP47496; F442_06520.
DR EnsemblProtists; ETP47497; ETP47497; F442_06520.
DR EnsemblProtists; ETP47498; ETP47498; F442_06520.
DR Proteomes; UP000018948; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR CDD; cd12647; RRM_UHM_SPF45; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR040052; RBM17.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR InterPro; IPR034653; SPF45_RRM.
DR PANTHER; PTHR13288:SF8; SPLICING FACTOR 45; 1.
DR PANTHER; PTHR13288; SPLICING FACTOR 45 SPF45; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00361; RRM_1; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018948};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 341..427
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 122..332
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 122..153
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 195..210
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 235..257
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 258..330
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 438 AA; 48772 MW; D83BE73EB5D19F88 CRC64;
MSMLPAALAA GRGKSPMRSA ISLAFKPASV ARRAMAANVG FQKEQKDKPE AARPIGSGLG
YVAATEVKVT SLQQHQKQEK EDVDVGLDAA GGHFFQVTYR DEYHPARPNS YEVYCKERED
RKKMEEVKKE LTRRQREQER EGKLEREQLA KDLAEGRAPT MKLPAPAGRG RGMTMPAWMR
KKIEESAAVA ASQPESEHDG DRDRESKSSE MNATATEGQF EDAVERRGGL GFSNRGIGFS
SSGVTAESNA KPRGNTSSGG HHDSKDRDSA HRPELDEFGR EIRPKRKYGD QREGRGVSSS
NYDDRRDIWN RNSASDSSNE KRRRTSGWDR RSPVRASLTS SVVLLQNMVG PGEVDDELQE
EVKEECSEKY GPVIKCVIYE VTGRVPPEEA VRTFIQFKNA GDATKALTGL NGRFFGGRKV
KAVYYDEGKF QRMDLNSQ
//
