ID W3WQW7_PESFW Unreviewed; 1771 AA.
AC W3WQW7;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=Lid2 complex component lid2 {ECO:0008006|Google:ProtNLM};
GN ORFNames=PFICI_11606 {ECO:0000313|EMBL:ETS76219.1};
OS Pestalotiopsis fici (strain W106-1 / CGMCC3.15140).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Xylariomycetidae; Xylariales; Sporocadaceae; Pestalotiopsis.
OX NCBI_TaxID=1229662 {ECO:0000313|EMBL:ETS76219.1, ECO:0000313|Proteomes:UP000030651};
RN [1] {ECO:0000313|Proteomes:UP000030651}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=W106-1 / CGMCC3.15140 {ECO:0000313|Proteomes:UP000030651};
RX PubMed=25623211; DOI=10.1186/s12864-014-1190-9;
RA Wang X., Zhang X., Liu L., Xiang M., Wang W., Sun X., Che Y., Guo L.,
RA Liu G., Guo L., Wang C., Yin W.B., Stadler M., Zhang X., Liu X.;
RT "Genomic and transcriptomic analysis of the endophytic fungus
RT Pestalotiopsis fici reveals its lifestyle and high potential for synthesis
RT of natural products.";
RL BMC Genomics 16:28-28(2015).
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC Evidence={ECO:0000256|ARBA:ARBA00001954};
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DR EMBL; KI912117; ETS76219.1; -; Genomic_DNA.
DR RefSeq; XP_007838378.1; XM_007840187.1.
DR STRING; 1229662.W3WQW7; -.
DR GeneID; 19276619; -.
DR KEGG; pfy:PFICI_11606; -.
DR eggNOG; KOG1246; Eukaryota.
DR HOGENOM; CLU_000991_0_0_1; -.
DR InParanoid; W3WQW7; -.
DR OMA; GFDQVCK; -.
DR OrthoDB; 48111at2759; -.
DR Proteomes; UP000030651; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15518; PHD_Ecm5p_Lid2p_like; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR013637; Lys_sp_deMease-like_dom.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR004198; Znf_C5HC2.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF133; LYSINE-SPECIFIC DEMETHYLASE LID; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR Pfam; PF00628; PHD; 2.
DR Pfam; PF08429; PLU-1; 1.
DR Pfam; PF02928; zf-C5HC2; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000030651};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 97..138
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 162..255
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT DOMAIN 468..518
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 610..776
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT DOMAIN 1340..1389
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 1..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 272..312
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 325..464
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1004..1027
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1311..1330
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1487..1506
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1542..1653
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1706..1726
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..62
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 280..312
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 331..409
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 410..438
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1547..1586
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1594..1609
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1771 AA; 199569 MW; 6B0A234F4CA4AC78 CRC64;
MVQTPAVGAS ASGAGSLNGS SRASPAVASS ASHTTTTNGT KSKANLNGNG YHPPNPQLPL
SSMRSAPLDL RSVERRGQPT ASRETTKRSR PFGLQEAPSY RPTEAEWKDP FEYIRKISGE
ANKFGLCKII PPDSWNPDFA IDTEKFHFRT RKQELNSVEG STRANLTYLD ALAKFHKQQG
TNLNRLPYVD KKPLDLYRLK KCVEARGGFE KVCKAKKWAE IGRDLGYSGK IMSSLSTSLK
NSYDRWLTPY ENYLRQAKPG VYQQLEFEYG GPLTPSPAPS PMKRSTVNTP SSLRGDSPAR
NATESLQASF SLNPIKQEHE REMVMNDAPT PTSAPAPTSG FTPINSGGSG GFTAVNAGFT
SINRPHSTDT KSFTPPKQYG SPMSSAKNTP DFRPSALGLS NPLKRQLSTD SLDISKKENG
ADRDESDNGS RRSKRLKQDT VPTVAGSHMS LFRPLGPRLP RDENLPPGER CENCGKGEET
GWVAVCEGCD LAYHGPCIDP PLKSNPGPEW NCPRCLVGDG QFGFEEGGLY SLKSFQEKAA
DFKQGYFENR MPFDPVLNCS RPVTEDDVER EFWRLVTSIE ETVEVEYGAD IHCTTHGSGF
PTSERNPTNP YSTDFWNLNV LPLHPESLFR HIKSDISGMT VPWVYVGMIF STFCWHNEDH
FAYSANYQHF GATKTWYGIP AEDTQKFEAA MKAAVPELFE TQPDLLFQLV TLLTPEQLKK
AGVRVYALDQ RAGQLVVTFP QAYHAGFNHG FNFNEAVNFA PHDWEPYGLA GVERLKEFRK
QSCFSHDELL WTAADGVSSG LTIQTARWLA PALERIHKRE ILQREQFHAK HVEGNKHACV
ITAKEHEPCT LKFQIMDEDV PEEEYQCSYC KCYAYLTRFK CTRSNKYLCI QHAGSHACCD
LPESDRFAGK EHILFYRKTT EDMNETHRKV AEKATLPEAW EDKYDKLLDE GGTPTLKTLR
NLLSEGERIP YDLPSLPALK EFVDRCNEWV EEATNYTVRK QQNRRKNDKV WQSGMRKSIG
NSYQEQKERE MRKVDNIHRL IEDAERIGFD CPEITQLKER AEAIKDFQNN AESALEHIII
QSEEQIEELL EQGRSFNVDM PEIDKLQLIL EQKRWNTKAK SNRTVFMTLD DVTQLIEEGV
RLDIPPYNDH MKFFNEKLAA GRQWQAKATE LINAETVHYP QLEALSNQVQ HGALPVSQET
LHAVDQILHK QREAHRQILD LMDRSRDEDY TKRPKYLDVL DVMKKLEDLN SKPTGTLDLE
REQRRHEDWM RKGKKLFGKT NAPLHILKNH LEYVLDRNLD CFDITSDKPR LPAEPASRAP
SEERDANKVP RSWDDPAFRE VFCICRRIEA GMMIECELCH EWYHGKCLKI ARGKVKEDDK
YTCPICDWRV KIPRDAARPK LEDLISWQDE ISGLPFQPEE EEILRKIIDN AQDFRNHIAV
YCNPIMATAS EAETQRFYLR KIEGAEILLA FETNFFRQEL HKWSPVAPEP PPVLDVSKST
RKPRPTKLQR MLAQHGVEDP EDLPESLRAK AVSLKRKALN AESAGVNPAG GPSSSSGPGH
SPSAQSFGSA SHIYFGRTSQ PPTPALPGNS HGHPARSADS NSSSRPGSAM HGGSMDPDGH
NSSTMQPDFF LGGEGGGPGP RLMASDREPL SLEERLLSGQ DDSLNLNLQS EAEKNKALEI
LGRTEEGRRR AEEIFGPDVW DAESRLRGSR SMTGDGDLRQ EDGDDKDVDK MFLDLTNADD
DDGEGKRVAV ATMTTENFEA ERDAMDMMDS D
//
