ID W5BRE5_WHEAT Unreviewed; 575 AA.
AC W5BRE5;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=CAMPLR22A2D_LOCUS4599 {ECO:0000313|EMBL:SPT19972.1},
GN CFC21_109358 {ECO:0000313|EMBL:KAF7109025.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS2D02G461000.1.cds1};
RN [1] {ECO:0000313|EMBL:KAF7109025.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7109025.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS2D02G461000.1.cds1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS2D02G461000.1.cds1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EMBL:SPT19972.1, ECO:0000313|Proteomes:UP000280104}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Thind KAUR A.;
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EnsemblPlants:TraesCS2D02G461000.1.cds1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [5] {ECO:0000313|EMBL:KAF7109025.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7109025.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM022231; KAF7109025.1; -; Genomic_DNA.
DR EMBL; LS480641; SPT19972.1; -; Genomic_DNA.
DR SMR; W5BRE5; -.
DR STRING; 4565.W5BRE5; -.
DR PaxDb; 4565-Traes_2DL_12965A54A-3; -.
DR EnsemblPlants; TraesCS2D02G461000.1; TraesCS2D02G461000.1.cds1; TraesCS2D02G461000.
DR Gramene; TraesCAD_scaffold_061672_01G000200.1; TraesCAD_scaffold_061672_01G000200.1; TraesCAD_scaffold_061672_01G000200.
DR Gramene; TraesCLE_scaffold_034601_01G000200.1; TraesCLE_scaffold_034601_01G000200.1; TraesCLE_scaffold_034601_01G000200.
DR Gramene; TraesCS2D02G461000.1; TraesCS2D02G461000.1.cds1; TraesCS2D02G461000.
DR Gramene; TraesKAR2D01G0411370.1; cds.TraesKAR2D01G0411370.1; TraesKAR2D01G0411370.
DR Gramene; TraesPAR_scaffold_050325_01G000200.1; TraesPAR_scaffold_050325_01G000200.1; TraesPAR_scaffold_050325_01G000200.
DR Gramene; TraesROB_scaffold_011487_01G000100.1; TraesROB_scaffold_011487_01G000100.1; TraesROB_scaffold_011487_01G000100.
DR Gramene; TraesWEE_scaffold_114747_01G000100.1; TraesWEE_scaffold_114747_01G000100.1; TraesWEE_scaffold_114747_01G000100.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_8_1; -.
DR Proteomes; UP000019116; Chromosome 2D.
DR Proteomes; UP000280104; Chromosome ii.
DR Proteomes; UP000815260; Chromosome 7D.
DR ExpressionAtlas; W5BRE5; baseline.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47928:SF81; OS01G0754700 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 35..65
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 66..100
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 167..201
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 268..302
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 303..338
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 339..369
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 486..575
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 575 AA; 64864 MW; 7579634EBCF2EB7F CRC64;
MFALHELLQL CAKRRSLLVG KSCHGLAIHF GMVTDTVTCN ILINLYTKCG RNDCARHVFD
AMITRSIVSW NTMIAGYTQS GEDVEALKLF QRMQREGRQL TKFTLSSTIC ACAAKYAINE
CKQLHAIAIK LALDSNSFVG TAILDVYAKC NMIKDACWVF EKMPDKTLVT WSSLFAGYVQ
NGLHEEALCL FRNAQREGVK LTEFTLSAII SACASLALKI EGTQLHAVIV KCGFHGNFFV
AASLVDVYAR CGQIENSYAL FAYMEQKNVV IWNAMIAGFS RHARSWESMI LFEKMHQLGI
FPNEVTYLSM LSVCSHAGLV EEGRHYFNLL MSDRTVEPNV LHYSCMVDVL GRSGKTDEAW
ELLHKMPFEP TASMWGSLLG SCRNYNNSGL ARIAAEQLFQ LEPDNGGNHV LLSNVYAASG
NWENVLMARK YLKDSGAKKE MGRSWIEAKG KIHVFVVGER KHPAITDIYN KLEEIYHDVR
KFAHMTKIEC DLHDVHDDQK EELLKHHSEK LALAFGLISL PPNIPIIIHK NLRICGDCHS
FMKVVAHITE RLFIVRDANR FHHFKDGSCS CGDFW
//
