ID W5D3S3_WHEAT Unreviewed; 530 AA.
AC W5D3S3;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE RecName: Full=UBC core domain-containing protein {ECO:0000259|PROSITE:PS50127};
GN ORFNames=CFC21_041962 {ECO:0000313|EMBL:KAF7030423.1},
GN TRAES_3BF073600120CFD_c1 {ECO:0000313|EMBL:CDM83955.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EMBL:CDM83955.1};
RN [1] {ECO:0000313|EMBL:CDM83955.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=25035497; DOI=10.1126/science.1249721;
RA Choulet F., Alberti A., Theil S., Glover N., Barbe V., Daron J.,
RA Pingault L., Sourdille P., Couloux A., Paux E., Leroy P., Mangenot S.,
RA Guilhot N., Le Gouis J., Balfourier F., Alaux M., Jamilloux V., Poulain J.,
RA Durand C., Bellec A., Gaspin C., Safar J., Dolezel J., Rogers J.,
RA Vandepoele K., Aury J.M., Mayer K., Berges H., Quesneville H., Wincker P.,
RA Feuillet C.;
RT "Structural and functional partitioning of bread wheat chromosome 3B.";
RL Science 345:1249721-1249721(2014).
RN [2] {ECO:0000313|EMBL:KAF7030423.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7030423.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS3B02G303300.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS3B02G303300.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [4] {ECO:0000313|EnsemblPlants:TraesCS3B02G303300.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [5] {ECO:0000313|EMBL:KAF7030423.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7030423.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG670306; CDM83955.1; -; Genomic_DNA.
DR EMBL; CM022218; KAF7030423.1; -; Genomic_DNA.
DR SMR; W5D3S3; -.
DR STRING; 4565.W5D3S3; -.
DR PaxDb; 4565-Traes_3B_CA8D8F541-2; -.
DR EnsemblPlants; TraesCS3B02G303300.1; TraesCS3B02G303300.1; TraesCS3B02G303300.
DR Gramene; TraesCS3B02G303300.1; TraesCS3B02G303300.1; TraesCS3B02G303300.
DR Gramene; TraesCS3B03G0780600.1; TraesCS3B03G0780600.1.CDS; TraesCS3B03G0780600.
DR Gramene; TraesPAR_scaffold_070277_01G000100.1; TraesPAR_scaffold_070277_01G000100.1; TraesPAR_scaffold_070277_01G000100.
DR Gramene; TraesROB_scaffold_028566_01G000100.1; TraesROB_scaffold_028566_01G000100.1; TraesROB_scaffold_028566_01G000100.
DR HOGENOM; CLU_025097_5_0_1; -.
DR OMA; HEFQAQV; -.
DR OrthoDB; 5311053at2759; -.
DR Proteomes; UP000019116; Chromosome 3B.
DR Proteomes; UP000815260; Chromosome 3B.
DR ExpressionAtlas; W5D3S3; baseline.
DR GO; GO:0061631; F:ubiquitin conjugating enzyme activity; IBA:GO_Central.
DR CDD; cd00195; UBCc; 1.
DR Gene3D; 3.10.110.10; Ubiquitin Conjugating Enzyme; 1.
DR InterPro; IPR000608; UBQ-conjugat_E2.
DR InterPro; IPR016135; UBQ-conjugating_enzyme/RWD.
DR PANTHER; PTHR46116; (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME; 1.
DR PANTHER; PTHR46116:SF20; OS09G0294300 PROTEIN; 1.
DR Pfam; PF00179; UQ_con; 1.
DR SMART; SM00212; UBCc; 1.
DR SUPFAM; SSF54495; UBC-like; 1.
DR PROSITE; PS50127; UBC_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000019116}.
FT DOMAIN 268..426
FT /note="UBC core"
FT /evidence="ECO:0000259|PROSITE:PS50127"
SQ SEQUENCE 530 AA; 58785 MW; 7BC8740B1F9B5BD1 CRC64;
MAEGSSRSYP FGGSLVLDDP EVVEVPPEVA AGWNSVRQKR KRAQVAPHEI IELDADDDHD
GVTIIDAKTS DYKNKQAVGH PVNCWKNAKI GLAAEDIALP SAISAKVVYP WDGLGTYHGG
PKLPIYGLPT DFAGPSSFAS YPWQSVGTYH TGTLPPAYFD DVLGAVGEEH YAYDEGDFSN
YSYNTPLMEN DSSFNLNVDH YGFPPSVGLY LPRGHVAPAD STQQRQQVKI VESEIEEKYK
AFKQFDTVGD HSDHFYLKFR TVKKPSKDWV KRIQHEWKVL GKDLPDTIFV RAYEDRMDLL
RAVIVGPAGT PYHDGLFFFD VYFPSQYPCK PPQVNYRSGG LRLNPNLYAC GKVCLSLLNT
WTGSGCEMWN PSTSTMLQVL VSIQALVLNA KPYFNEPGHS MYANTPLGEK QSLAYNEETF
LLSCRTMLYS LRNPPKHFEH FIGGHFRKYG RDILVGCKAY MGGAQVGCLA GDGVQDVDEG
DKSCSQNFMC SLEILFKGLI NEFTDLGVGC HEFQAQVVNS GAAADTTLRL
//