GenomeNet

Database: UniProt
Entry: W5IHL2_SCAIO
LinkDB: W5IHL2_SCAIO
Original site: W5IHL2_SCAIO 
ID   W5IHL2_SCAIO            Unreviewed;       882 AA.
AC   W5IHL2;
DT   19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT   19-MAR-2014, sequence version 1.
DT   24-JAN-2024, entry version 49.
DE   RecName: Full=Clp R domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=HMPREF9020_01390 {ECO:0000313|EMBL:EFG26306.1};
OS   Scardovia inopinata F0304.
OC   Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC   Bifidobacteriaceae; Scardovia.
OX   NCBI_TaxID=641146 {ECO:0000313|EMBL:EFG26306.1, ECO:0000313|Proteomes:UP000005777};
RN   [1] {ECO:0000313|EMBL:EFG26306.1, ECO:0000313|Proteomes:UP000005777}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=F0304 {ECO:0000313|EMBL:EFG26306.1,
RC   ECO:0000313|Proteomes:UP000005777};
RG   The Broad Institute Genome Sequencing Platform;
RA   Earl A., Ward D., Feldgarden M., Gevers D., Izard J., Baranova O.V.,
RA   Blanton J.M., Tanner A.C., Dewhirst F.E., Young S.K., Zeng Q., Gargeya S.,
RA   Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M.,
RA   Berlin A., Chapman S.B., Gearin G., Goldberg J., Griggs A., Gujja S.,
RA   Hansen M., Heiman D., Howarth C., Larimer J., Lui A., MacDonald P.J.,
RA   McCowen C., Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M.,
RA   Roberts A., Saif S., Shea T., Sisk P., Stolte C., Sykes S., Wortman J.,
RA   Nusbaum C., Birren B.;
RT   "The Genome Sequence of Scardovia inopinata F0304.";
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBUNIT: Homohexamer. The oligomerization is ATP-dependent.
CC       {ECO:0000256|ARBA:ARBA00026057}.
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|ARBA:ARBA00008675}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EFG26306.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; ADCX01000013; EFG26306.1; -; Genomic_DNA.
DR   RefSeq; WP_006293780.1; NZ_GG770226.1.
DR   AlphaFoldDB; W5IHL2; -.
DR   eggNOG; COG0542; Bacteria.
DR   HOGENOM; CLU_005070_4_1_11; -.
DR   Proteomes; UP000005777; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 2.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   Gene3D; 4.10.860.10; UVR domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR001943; UVR_dom.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
DR   PROSITE; PS50151; UVR; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005777};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          2..145
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   DOMAIN          426..461
FT                   /note="UVR"
FT                   /evidence="ECO:0000259|PROSITE:PS50151"
FT   REGION          817..882
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          422..468
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        851..882
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   882 AA;  96641 MW;  7C22E6B8BCE81EB7 CRC64;
     MFERFTDRAR RVIVLAQEEA RSLKHNYIGT EHLLLGLIRE GEGVAAKALA SKGVELDATR
     QQVEEMIGKG SAAPTGHIPF TPHARQVLEL SLREALQLGH SYIGTEHVLL GLIREGEGVG
     TQVLVKMGVD VADLRTSVID AIRDTSADAS KNDMTNAGGI TDKSAKSGSS LLDQFGRNLT
     EEAREGKLDP VIGRSNEIER VMVILSRRTK NNPVLIGEPG VGKTAVVEGL AQKIVAGDVP
     ETLKDKQVYA LDLGSMIAGS RYRGDFEERL KKVFKEIKTR GDIVLFIDEI HTIVGAGSAD
     GAMGASDMLK PLLARGELQT IGATTTDEYR KYIEKDAALE RRFQPIQVAE PTIAETIEIL
     KGLRKKYEDH HHVTITDAAI QSAAELSARY IQDRNLPDKA IDLIDEAGAR LRIKRLTAPS
     ALKELDVKVA KVKADKDKAI ADQDFEKAAS LRDAQEKLEQ ERKDKEKSWR EGESDVSMVV
     DEDTIAHVIS SATGIPVFKL TETESKKLLN MEAELHKRVI GQDEAVEALS RSIRRARVGL
     KDPKRPSGSF IFAGPTGVGK TELAKALAEY LFDDEDALIR VDMSEFGEKY STSRLFGAPP
     GYVGYEEGGE LTEKVRRKPF SVILFDEIEK AHPDIFNTLL QVLDDGHLTD GQGRKVDFKN
     TIIIMTTNLG TNKIAQSQST GFNLGGNTET SYQRMKDQVQ SELKEQFRPE FLNRLDDIIV
     FKQLTESQVR QIVELDVKAL NDRLFERHMS MELTDAAKDL LAEKGFDPLL GARPLRRVIQ
     RDIEDAISEE ILMGKIRENE QIVVNAEGEG ILGEFTFSSH PYEVGGPDGD GTDGDSAQAA
     EPLPVGAEVN SAPASSDSSF DSSDSAEATG QAASSESGPV SE
//
DBGET integrated database retrieval system