ID W5JXY6_ASTMX Unreviewed; 142 AA.
AC W5JXY6;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE RecName: Full=PDZ domain-containing protein 11 {ECO:0000256|ARBA:ARBA00039345};
OS Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes;
OC Characoidei; Characidae; Astyanax.
OX NCBI_TaxID=7994 {ECO:0000313|Ensembl:ENSAMXP00000000196.1, ECO:0000313|Proteomes:UP000018467};
RN [1] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RA Jeffery W., Warren W., Wilson R.K.;
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RX PubMed=25329095; DOI=10.1038/ncomms6307;
RA McGaugh S.E., Gross J.B., Aken B., Blin M., Borowsky R., Chalopin D.,
RA Hinaux H., Jeffery W.R., Keene A., Ma L., Minx P., Murphy D., O'Quin K.E.,
RA Retaux S., Rohner N., Searle S.M., Stahl B.A., Tabin C., Volff J.N.,
RA Yoshizawa M., Warren W.C.;
RT "The cavefish genome reveals candidate genes for eye loss.";
RL Nat. Commun. 5:5307-5307(2014).
RN [3] {ECO:0000313|Ensembl:ENSAMXP00000000196.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR RefSeq; XP_007254476.1; XM_007254414.2.
DR RefSeq; XP_007254477.1; XM_007254415.2.
DR AlphaFoldDB; W5JXY6; -.
DR Ensembl; ENSAMXT00000000196.2; ENSAMXP00000000196.1; ENSAMXG00000000191.2.
DR GeneID; 103041495; -.
DR KEGG; amex:103041495; -.
DR CTD; 51248; -.
DR eggNOG; KOG3528; Eukaryota.
DR GeneTree; ENSGT00940000153222; -.
DR HOGENOM; CLU_133335_0_0_1; -.
DR OMA; IIMRVRF; -.
DR OrthoDB; 3014144at2759; -.
DR Proteomes; UP000018467; Unassembled WGS sequence.
DR Bgee; ENSAMXG00000000191; Expressed in bone element and 14 other cell types or tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR CDD; cd00992; PDZ_signaling; 1.
DR Gene3D; 2.30.42.10; -; 1.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR036034; PDZ_sf.
DR PANTHER; PTHR14063:SF1; PDZ DOMAIN-CONTAINING PROTEIN 11; 1.
DR PANTHER; PTHR14063; PROTEIN LIN-7 HOMOLOG; 1.
DR Pfam; PF00595; PDZ; 1.
DR SMART; SM00228; PDZ; 1.
DR SUPFAM; SSF50156; PDZ domain-like; 1.
DR PROSITE; PS50106; PDZ; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018467}.
FT DOMAIN 49..119
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
SQ SEQUENCE 142 AA; 16419 MW; 4D64F096124F9B17 CRC64;
MDQKIPYDDY QLPVVFLPSY ENPPAWIPAQ DRINHPDYNN ELTQFLPRTI VLKKPPGAQL
GFNIRGGKAS QLGIFISKVV PDSDAHRAGL QEGDQVLSVN EVDFQDIEHS RAVEILKTAR
EILMRVRYFP YNYQRQKERT VH
//
