ID W5KI97_ASTMX Unreviewed; 162 AA.
AC W5KI97;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=C1q domain-containing protein {ECO:0000259|PROSITE:PS50871};
OS Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes;
OC Characoidei; Characidae; Astyanax.
OX NCBI_TaxID=7994 {ECO:0000313|Ensembl:ENSAMXP00000007309.2, ECO:0000313|Proteomes:UP000018467};
RN [1] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RA Jeffery W., Warren W., Wilson R.K.;
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RX PubMed=25329095; DOI=10.1038/ncomms6307;
RA McGaugh S.E., Gross J.B., Aken B., Blin M., Borowsky R., Chalopin D.,
RA Hinaux H., Jeffery W.R., Keene A., Ma L., Minx P., Murphy D., O'Quin K.E.,
RA Retaux S., Rohner N., Searle S.M., Stahl B.A., Tabin C., Volff J.N.,
RA Yoshizawa M., Warren W.C.;
RT "The cavefish genome reveals candidate genes for eye loss.";
RL Nat. Commun. 5:5307-5307(2014).
RN [3] {ECO:0000313|Ensembl:ENSAMXP00000007309.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR AlphaFoldDB; W5KI97; -.
DR Ensembl; ENSAMXT00000007309.2; ENSAMXP00000007309.2; ENSAMXG00000007123.2.
DR eggNOG; ENOG502SSFS; Eukaryota.
DR GeneTree; ENSGT00940000163520; -.
DR HOGENOM; CLU_001074_8_1_1; -.
DR InParanoid; W5KI97; -.
DR Proteomes; UP000018467; Unassembled WGS sequence.
DR Bgee; ENSAMXG00000007123; Expressed in intestine and 2 other cell types or tissues.
DR Gene3D; 2.60.120.40; -; 1.
DR InterPro; IPR001073; C1q_dom.
DR InterPro; IPR008983; Tumour_necrosis_fac-like_dom.
DR PANTHER; PTHR22923:SF116; CEREBELLIN 5-RELATED; 1.
DR PANTHER; PTHR22923; CEREBELLIN-RELATED; 1.
DR Pfam; PF00386; C1q; 1.
DR PRINTS; PR00007; COMPLEMNTC1Q.
DR SMART; SM00110; C1Q; 1.
DR SUPFAM; SSF49842; TNF-like; 1.
DR PROSITE; PS50871; C1Q; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018467}.
FT DOMAIN 23..162
FT /note="C1q"
FT /evidence="ECO:0000259|PROSITE:PS50871"
SQ SEQUENCE 162 AA; 17721 MW; 8C516C204B5E303B CRC64;
GYKFISVALY VCCCGNPNSW SSLELEKVAF SAALGLPAGL RGPIGSETTI VYKNVLTNVG
NAYNPATGIF TAPFKGVYYI RFTGSVYDNK SSNMGVNLYK NGHHLMHLGE NGFDGVAKHA
SSGVTIELVR GDQVYTRLPA NYVLWDDSYF RTSFSGFFLF PM
//
