ID W5KIF3_ASTMX Unreviewed; 514 AA.
AC W5KIF3;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 24-JAN-2024, entry version 53.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
OS Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes;
OC Characoidei; Characidae; Astyanax.
OX NCBI_TaxID=7994 {ECO:0000313|Ensembl:ENSAMXP00000007365.2, ECO:0000313|Proteomes:UP000018467};
RN [1] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RA Jeffery W., Warren W., Wilson R.K.;
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RX PubMed=25329095; DOI=10.1038/ncomms6307;
RA McGaugh S.E., Gross J.B., Aken B., Blin M., Borowsky R., Chalopin D.,
RA Hinaux H., Jeffery W.R., Keene A., Ma L., Minx P., Murphy D., O'Quin K.E.,
RA Retaux S., Rohner N., Searle S.M., Stahl B.A., Tabin C., Volff J.N.,
RA Yoshizawa M., Warren W.C.;
RT "The cavefish genome reveals candidate genes for eye loss.";
RL Nat. Commun. 5:5307-5307(2014).
RN [3] {ECO:0000313|Ensembl:ENSAMXP00000007365.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR AlphaFoldDB; W5KIF3; -.
DR Ensembl; ENSAMXT00000007365.2; ENSAMXP00000007365.2; ENSAMXG00000007174.2.
DR eggNOG; KOG1721; Eukaryota.
DR GeneTree; ENSGT00940000164807; -.
DR HOGENOM; CLU_590450_0_0_1; -.
DR InParanoid; W5KIF3; -.
DR Proteomes; UP000018467; Unassembled WGS sequence.
DR Bgee; ENSAMXG00000007174; Expressed in testis and 14 other cell types or tissues.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 5.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR24399; ZINC FINGER AND BTB DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR24399:SF17; ZINC FINGER AND BTB DOMAIN-CONTAINING 38; 1.
DR Pfam; PF00096; zf-C2H2; 3.
DR SMART; SM00355; ZnF_C2H2; 7.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 3.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 6.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 6.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000018467};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 296..323
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 324..351
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 352..373
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 376..403
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 426..453
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 454..481
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 261..280
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 514 AA; 58251 MW; FAFC47E58B182457 CRC64;
MMQCGEKKNY VNVKVFVRIT QLFSTVYGFA RTLILKAIVV SSVSVSNGFS AMASVTDVGK
FESLNFSIHE RLTTVAGEIF QLVKETLSEF QEEVYRCRQE NIQLKRRLAE TSSTEPDVQL
KHVDILVEDQ NSSQGLVGAE LDSETSAVQV KVEFSTQQAQ QPLCHYSTPA CNPEPSPVAP
TELPHADFPA HVDDSTLHKS DGGHDGGHDE GVDVYMNSYV TVKLERCDSQ LTGIDQQSYS
SLVQNGSGSN HDYKRAVKDE AAAHWVQSSD EPGDALPPPP PQRMINSMTG EKMSLFHCKY
CPETFEHAEQ FKAHMQKHRK EAGFRCEFCG KCYSSNSAFQ NHVRMHTGDK PYLCRFCNMT
FSLKSSLEEH EKIRPYSCTK CGKHFIWLNQ ARLHVQNEHP ENPDTIIKRS TKHGVLKVAH
TGVGVNYCQL CGKNYSTRQV LRIHLRTHTG EKPYNCRFCN KRFTQKCHMI QHERIHTGEN
KYSCSVCGMS YRWLRSAKVH IQNHHSQGAE ILRN
//