ID W5MF43_LEPOC Unreviewed; 239 AA.
AC W5MF43;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=Complement C1q B chain {ECO:0000313|Ensembl:ENSLOCP00000007002.1};
GN Name=C1QB {ECO:0000313|Ensembl:ENSLOCP00000007002.1};
OS Lepisosteus oculatus (Spotted gar).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae;
OC Lepisosteus.
OX NCBI_TaxID=7918 {ECO:0000313|Ensembl:ENSLOCP00000007002.1, ECO:0000313|Proteomes:UP000018468};
RN [1] {ECO:0000313|Proteomes:UP000018468}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E.S., Lindblad-Toh K.;
RT "The Draft Genome of Lepisosteus oculatus.";
RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLOCP00000007002.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular
CC matrix {ECO:0000256|ARBA:ARBA00004498}.
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DR EMBL; AHAT01018478; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; W5MF43; -.
DR STRING; 7918.ENSLOCP00000007002; -.
DR Ensembl; ENSLOCT00000007010.1; ENSLOCP00000007002.1; ENSLOCG00000005797.1.
DR eggNOG; ENOG502S2X9; Eukaryota.
DR GeneTree; ENSGT00940000161091; -.
DR HOGENOM; CLU_001074_0_2_1; -.
DR InParanoid; W5MF43; -.
DR OMA; CDTSEGF; -.
DR Proteomes; UP000018468; Linkage group LG26.
DR Bgee; ENSLOCG00000005797; Expressed in heart and 13 other cell types or tissues.
DR Gene3D; 2.60.120.40; -; 1.
DR InterPro; IPR001073; C1q_dom.
DR InterPro; IPR008983; Tumour_necrosis_fac-like_dom.
DR PANTHER; PTHR15427:SF18; COMPLEMENT C1Q SUBCOMPONENT SUBUNIT B; 1.
DR PANTHER; PTHR15427; EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER; 1.
DR Pfam; PF00386; C1q; 1.
DR PRINTS; PR00007; COMPLEMNTC1Q.
DR SMART; SM00110; C1Q; 1.
DR SUPFAM; SSF49842; TNF-like; 1.
DR PROSITE; PS50871; C1Q; 1.
PE 4: Predicted;
KW Extracellular matrix {ECO:0000256|ARBA:ARBA00022530};
KW Reference proteome {ECO:0000313|Proteomes:UP000018468};
KW Secreted {ECO:0000256|ARBA:ARBA00022530}; Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..26
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 27..239
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004867705"
FT DOMAIN 111..239
FT /note="C1q"
FT /evidence="ECO:0000259|PROSITE:PS50871"
FT REGION 39..107
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..69
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 239 AA; 24678 MW; A39364569AD8FF31 CRC64;
QACDIMACKA VVLVVVLTSA VTLSAADTCS KYRGYPGIPG KPGAHGAHGK DGVPGEKGEK
GDDGRLVKGQ KGEPGPMGSP GRAGLQGDPG EQGLPGPAGP KGAMGSPVAI NTTEKSVFSF
SKTSNMPPRS YQPIRFERAN LAGDPLPGGR FTCEAKGAYY FTYHVTARGP VCIGIHKGAD
KVVVFCDSVY QGYLVTSGSV VLQLDKGDVV SLQPTEKNSV LGSDGADSIF TGFLLFPMK
//
