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Database: UniProt
Entry: W5MQH8_LEPOC
LinkDB: W5MQH8_LEPOC
Original site: W5MQH8_LEPOC 
ID   W5MQH8_LEPOC            Unreviewed;       863 AA.
AC   W5MQH8;
DT   16-APR-2014, integrated into UniProtKB/TrEMBL.
DT   16-APR-2014, sequence version 1.
DT   24-JAN-2024, entry version 51.
DE   SubName: Full=Transforming growth factor beta receptor associated protein 1 {ECO:0000313|Ensembl:ENSLOCP00000010637.1};
OS   Lepisosteus oculatus (Spotted gar).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae;
OC   Lepisosteus.
OX   NCBI_TaxID=7918 {ECO:0000313|Ensembl:ENSLOCP00000010637.1, ECO:0000313|Proteomes:UP000018468};
RN   [1] {ECO:0000313|Proteomes:UP000018468}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA   MacCallum I., Young S., Walker B.J., Lander E.S., Lindblad-Toh K.;
RT   "The Draft Genome of Lepisosteus oculatus.";
RL   Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSLOCP00000010637.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   EMBL; AHAT01003425; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_006639313.1; XM_006639250.2.
DR   RefSeq; XP_015219881.1; XM_015364395.1.
DR   RefSeq; XP_015219882.1; XM_015364396.1.
DR   RefSeq; XP_015219883.1; XM_015364397.1.
DR   AlphaFoldDB; W5MQH8; -.
DR   STRING; 7918.ENSLOCP00000010637; -.
DR   Ensembl; ENSLOCT00000010652.1; ENSLOCP00000010637.1; ENSLOCG00000008737.1.
DR   GeneID; 102698506; -.
DR   KEGG; loc:102698506; -.
DR   CTD; 9392; -.
DR   eggNOG; KOG2063; Eukaryota.
DR   GeneTree; ENSGT00530000063596; -.
DR   HOGENOM; CLU_004190_3_0_1; -.
DR   InParanoid; W5MQH8; -.
DR   OMA; VLKEIQC; -.
DR   OrthoDB; 198927at2759; -.
DR   Proteomes; UP000018468; Linkage group LG17.
DR   Bgee; ENSLOCG00000008737; Expressed in intestine and 13 other cell types or tissues.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IEA:UniProt.
DR   GO; GO:0016020; C:membrane; IBA:GO_Central.
DR   GO; GO:0006914; P:autophagy; IBA:GO_Central.
DR   GO; GO:0034058; P:endosomal vesicle fusion; IBA:GO_Central.
DR   GO; GO:0006886; P:intracellular protein transport; IEA:UniProtKB-UniRule.
DR   InterPro; IPR000547; Clathrin_H-chain/VPS_repeat.
DR   InterPro; IPR001180; CNH_dom.
DR   InterPro; IPR032914; Vam6/VPS39/TRAP1.
DR   InterPro; IPR019452; VPS39/TGF_beta_rcpt-assoc_1.
DR   InterPro; IPR019453; VPS39/TGF_beta_rcpt-assoc_2.
DR   PANTHER; PTHR12894; CNH DOMAIN CONTAINING; 1.
DR   PANTHER; PTHR12894:SF29; TRANSFORMING GROWTH FACTOR-BETA RECEPTOR-ASSOCIATED PROTEIN 1 HOMOLOG; 1.
DR   Pfam; PF00780; CNH; 1.
DR   Pfam; PF10366; Vps39_1; 1.
DR   Pfam; PF10367; Vps39_2; 1.
DR   PROSITE; PS50236; CHCR; 1.
DR   PROSITE; PS50219; CNH; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000018468}.
FT   DOMAIN          23..296
FT                   /note="CNH"
FT                   /evidence="ECO:0000259|PROSITE:PS50219"
FT   REPEAT          563..727
FT                   /note="CHCR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU01006"
SQ   SEQUENCE   863 AA;  98462 MW;  8F26D33856693F7A CRC64;
     MSVKAFELVL AVERELLMGD KPRINIECIE CCGKNIYIGT NDCFLHHFLL EEKSSSKGNP
     AFAAQKQLQR HLGLKKPVNE LKAASALNRL IVLCDNTIMV VNMLNLEPVP SGAKIKGVVT
     FTVNENPVNG DPFCVEIGVI SVKKRTIQIY MVYEDRVQIV KELSTPEQPS AIGLDGYFLC
     LALTTQYIIL NYNTGASQDL FPYDSEERKP IVKRIGREEF LLAAPGGLGM FATAAGISQR
     APVRWSENVI GAAVCFPYVV ALDEGFITVH SMLDQQLKQT LSFRDGHILQ DFEGKVVLTT
     TKAVYVLVPL PLERQIQDLL ASHRVEEALV LAEGARRNIP KDKFQVMYRR ILQQAGFIQF
     GRLQFSEAKE HFRKGHLDVR ELISLYPLLL PTTSTFTRSH PPLHEFADLN HLTQGDQKKI
     LKCKRFLISY LSEIRSTEVA NGYRDDVDTA LLKLYAEANH ESLLDLLVSE NACVLMDSVP
     WLEKHKKFFA LGLLYHYNGQ DDAAVQLWMQ IVNGELHDDT RADLYEYIVD FLTFSSKQDL
     IWKYADWALQ KNEKVGVQIF TKRPEDEEKK GKLNPDNVIK YLHKYSQAII LYLEHLVFEK
     NIQKEKFHSH LAALYLDRVL QLHSQSETPS EELSSSRTKL QNLLQKSNLY RVQLLLGKIK
     DTDLKFECAI LYGKLEEYDK ALHILVHQLK DFQAAERYCL WASEDKDPSY RQRLFHMLLA
     LYMDPSISND ALVMAAVDLL NRHAEVFDAV RVLRLVPESW SVQLLCPFLS GAIRESMHSK
     RMSQVALGLA RSENIIHKHE KMKSKGGPIF LSEKKGCQLC HNTFSEPEFV FHPSGIPIHT
     HCAAKRNRES PSRRQYPNVN NHT
//
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