ID W5N4A0_LEPOC Unreviewed; 1001 AA.
AC W5N4A0;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE SubName: Full=Ubiquitin specific peptidase 53b {ECO:0000313|Ensembl:ENSLOCP00000015459.1};
OS Lepisosteus oculatus (Spotted gar).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae;
OC Lepisosteus.
OX NCBI_TaxID=7918 {ECO:0000313|Ensembl:ENSLOCP00000015459.1, ECO:0000313|Proteomes:UP000018468};
RN [1] {ECO:0000313|Proteomes:UP000018468}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E.S., Lindblad-Toh K.;
RT "The Draft Genome of Lepisosteus oculatus.";
RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLOCP00000015459.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the peptidase C19 family.
CC {ECO:0000256|ARBA:ARBA00009085}.
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DR EMBL; AHAT01001831; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AHAT01001832; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AHAT01001833; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; W5N4A0; -.
DR Ensembl; ENSLOCT00000015488.1; ENSLOCP00000015459.1; ENSLOCG00000012556.1.
DR eggNOG; KOG1887; Eukaryota.
DR GeneTree; ENSGT00940000156337; -.
DR HOGENOM; CLU_287278_0_0_1; -.
DR InParanoid; W5N4A0; -.
DR OMA; QLPTHYC; -.
DR Proteomes; UP000018468; Linkage group LG4.
DR Bgee; ENSLOCG00000012556; Expressed in testis and 13 other cell types or tissues.
DR GO; GO:0005911; C:cell-cell junction; IBA:GO_Central.
DR GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:InterPro.
DR GO; GO:0010996; P:response to auditory stimulus; IBA:GO_Central.
DR GO; GO:0007605; P:sensory perception of sound; IBA:GO_Central.
DR CDD; cd02257; Peptidase_C19; 1.
DR Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR001394; Peptidase_C19_UCH.
DR InterPro; IPR028889; USP_dom.
DR PANTHER; PTHR22975:SF6; INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53; 1.
DR PANTHER; PTHR22975; UBIQUITIN SPECIFIC PROTEINASE; 1.
DR Pfam; PF00443; UCH; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR PROSITE; PS50235; USP_3; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000018468}.
FT DOMAIN 32..353
FT /note="USP"
FT /evidence="ECO:0000259|PROSITE:PS50235"
FT REGION 400..624
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 749..770
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 804..830
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 937..990
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 400..430
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 431..456
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 485..506
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 520..593
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 594..624
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 942..990
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1001 AA; 112846 MW; 6AF77478F78AB4A9 CRC64;
NQMAWVKFFK KQGGNLGKSY QPGSMLSLAP TKGLLNEPGQ NSCFLNSAVQ VLWQLDVFRR
SLRQLPGHVC LGEACIFCAL KSIFSQFQHS RERALPSDNL RHALAETFKD EQRFQLGFMD
DAAECFENIL ERIHLHIVPD TETDVCVSKS CITHQKFAMT LYEQCVCRSC GASSDPLPFT
ELVHYVSTTA LCQQVDLFLE KNERLRYDMF GELLQAASTI GDLRNCPSNC GQRIKIRRVL
MNCPEIVTIG FVWDAEQSDL TEDVIRSLGP QLNLSGLFYR VTDEQAKKTD LILVGMICYT
SKHYCAFAYH TKSSKWVFFD DATVKEVGSK WKDVVSKCIR GHFQPLLLFY SNPDGTAVST
EDAPRQTTLW SHYKSSVNGD GSVKIMPGDP KSKLREISRE VAQKAGEKKE IEKGQRRQES
GRHRDMPSDK TYPSSENGFR QNTDQRLYSS QGKGPSRNDK IAPPGLPSGQ SKMKQDVYNG
YDTDSSQDFK EKYSGGRSKP KAWKPMRETL NVDSVFSGPE KRQHSPKRRP PNQGDRTHYD
QEHVTSWPKE NRKQKSLMTI YEDEQKHETG SKSSLESEGK VHAEKERTKG GVNNKVRNDT
WKMQRTESGY ESSDRLSNGS TNLDSPVVEN FSSKDLRPIP EVQLSRDQLH HNRCDESVVD
SLHSSFSYGI IRPHHPQITK KGILVEFLKC SNNINQMTKI KLHSARNTSA NCERNKWPDG
DPVFLEEKHL QGNGEGYGNG NSSLQYLQKT SSSEWNSSDD LNGPMSEQED NTSIYGKTAL
LRSGIAQPFF PGAAREENCD TSEPIYQNLA PPLPPKKYAQ RQKTHLDDNR STLSATSHLH
PLQSDAAPPS KVSGSPPLTL LNNWAASKYS ANARSKPTSS NQERMDLFAK HKNRNNPKLD
MDVVGPSEEV LTTTYFSVDS CMTDSYRSRY HHQRSPLYYK DSKGGDQTSS GESELGDTNS
MEPSLQSNLS KARPETGYST NKTAVKWNPV STRNLDEHGY L
//