ID W5U7U2_ICTPU Unreviewed; 104 AA.
AC W5U7U2;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE RecName: Full=Cytochrome c oxidase subunit {ECO:0000256|RuleBase:RU004397};
DE AltName: Full=Cytochrome c oxidase polypeptide VIa {ECO:0000256|RuleBase:RU004397};
GN Name=COX6A {ECO:0000313|EMBL:AHH38018.1};
GN Synonyms=LOC108280912 {ECO:0000313|RefSeq:XP_017351907.1};
OS Ictalurus punctatus (Channel catfish) (Silurus punctatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
OC Ictaluridae; Ictalurus.
OX NCBI_TaxID=7998 {ECO:0000313|EMBL:AHH38018.1};
RN [1] {ECO:0000313|EMBL:AHH38018.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Mixed {ECO:0000313|EMBL:AHH38018.1};
RX PubMed=23127152; DOI=10.1186/1471-2164-13-595;
RA Liu S., Zhang Y., Zhou Z., Waldbieser G., Sun F., Lu J., Zhang J.,
RA Jiang Y., Zhang H., Wang X., Rajendran K.V., Khoo L., Kucuktas H.,
RA Peatman E., Liu Z.;
RT "Efficient assembly and annotation of the transcriptome of catfish by RNA-
RT Seq analysis of a doubled haploid homozygote.";
RL BMC Genomics 13:595-595(2012).
RN [2] {ECO:0000313|RefSeq:XP_017351907.1}
RP IDENTIFICATION.
RC TISSUE=Blood {ECO:0000313|RefSeq:XP_017351907.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- PATHWAY: Energy metabolism; oxidative phosphorylation.
CC {ECO:0000256|ARBA:ARBA00004673}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004167}. Mitochondrion
CC inner membrane {ECO:0000256|ARBA:ARBA00004434}; Single-pass membrane
CC protein {ECO:0000256|ARBA:ARBA00004434}.
CC -!- SIMILARITY: Belongs to the cytochrome c oxidase subunit 6A family.
CC {ECO:0000256|ARBA:ARBA00005553, ECO:0000256|RuleBase:RU004396}.
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DR EMBL; JT407535; AHH38018.1; -; mRNA.
DR RefSeq; XP_017351907.1; XM_017496418.3.
DR STRING; 7998.ENSIPUP00000012510; -.
DR Ensembl; ENSIPUT00000013042; ENSIPUP00000012516; ENSIPUG00000008523.
DR GeneID; 108280912; -.
DR KEGG; ipu:108280912; -.
DR OMA; IRTKPYC; -.
DR OrthoDB; 2912771at2759; -.
DR UniPathway; UPA00705; -.
DR Proteomes; UP000221080; Chromosome 2.
DR GO; GO:0005751; C:mitochondrial respiratory chain complex IV; IEA:InterPro.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR GO; GO:0006119; P:oxidative phosphorylation; IEA:UniProtKB-UniPathway.
DR CDD; cd00925; Cyt_c_Oxidase_VIa; 1.
DR Gene3D; 4.10.95.10; Cytochrome c oxidase, subunit VIa; 1.
DR InterPro; IPR001349; Cyt_c_oxidase_su6a.
DR InterPro; IPR018507; Cyt_c_oxidase_su6a_CS.
DR InterPro; IPR036418; Cyt_c_oxidase_su6a_sf.
DR PANTHER; PTHR11504; CYTOCHROME C OXIDASE POLYPEPTIDE VIA; 1.
DR PANTHER; PTHR11504:SF0; CYTOCHROME C OXIDASE SUBUNIT; 1.
DR Pfam; PF02046; COX6A; 1.
DR PIRSF; PIRSF000277; COX6A1; 1.
DR SUPFAM; SSF81411; Mitochondrial cytochrome c oxidase subunit VIa; 1.
DR PROSITE; PS01329; COX6A; 1.
PE 2: Evidence at transcript level;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU004397};
KW Mitochondrion {ECO:0000256|ARBA:ARBA00023128,
KW ECO:0000256|RuleBase:RU004397};
KW Mitochondrion inner membrane {ECO:0000256|ARBA:ARBA00022792,
KW ECO:0000256|RuleBase:RU004397};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 31..50
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 104 AA; 11386 MW; D93B2BE62DEAF0A4 CRC64;
MAASASSAVA RRVLAAASHG GHEGGVKTWR ILTFVLALPG VAVCMLNAYL KHQAGSHEQP
EFVPYPHLRI RTKPWPWGDG NHSLFHNAHT NALPTGYEHS HDHH
//