ID W5UCG4_ICTPU Unreviewed; 253 AA.
AC W5UCG4;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=Tetraspanin {ECO:0000256|RuleBase:RU361218};
GN Name=CD82 {ECO:0000313|EMBL:AHH39239.1};
GN Synonyms=cd37 {ECO:0000313|RefSeq:XP_017339910.1};
OS Ictalurus punctatus (Channel catfish) (Silurus punctatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
OC Ictaluridae; Ictalurus.
OX NCBI_TaxID=7998 {ECO:0000313|EMBL:AHH39239.1};
RN [1] {ECO:0000313|EMBL:AHH39239.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Mixed {ECO:0000313|EMBL:AHH39239.1};
RX PubMed=23127152; DOI=10.1186/1471-2164-13-595;
RA Liu S., Zhang Y., Zhou Z., Waldbieser G., Sun F., Lu J., Zhang J.,
RA Jiang Y., Zhang H., Wang X., Rajendran K.V., Khoo L., Kucuktas H.,
RA Peatman E., Liu Z.;
RT "Efficient assembly and annotation of the transcriptome of catfish by RNA-
RT Seq analysis of a doubled haploid homozygote.";
RL BMC Genomics 13:595-595(2012).
RN [2] {ECO:0000313|RefSeq:XP_017339910.1}
RP IDENTIFICATION.
RC TISSUE=Blood {ECO:0000313|RefSeq:XP_017339910.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141,
CC ECO:0000256|RuleBase:RU361218}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141, ECO:0000256|RuleBase:RU361218}.
CC -!- SIMILARITY: Belongs to the tetraspanin (TM4SF) family.
CC {ECO:0000256|ARBA:ARBA00006840, ECO:0000256|RuleBase:RU361218}.
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DR EMBL; JT410935; AHH39239.1; -; mRNA.
DR RefSeq; XP_017339910.1; XM_017484421.3.
DR STRING; 7998.ENSIPUP00000026639; -.
DR Ensembl; ENSIPUT00000027736; ENSIPUP00000026639; ENSIPUG00000018027.
DR Ensembl; ENSIPUT00000027752; ENSIPUP00000026655; ENSIPUG00000018027.
DR Ensembl; ENSIPUT00000027764; ENSIPUP00000026667; ENSIPUG00000018027.
DR GeneID; 108274318; -.
DR KEGG; ipu:108274318; -.
DR CTD; 951; -.
DR OMA; REGCAKS; -.
DR OrthoDB; 5359808at2759; -.
DR Proteomes; UP000221080; Chromosome 13.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 1.10.1450.10; Tetraspanin; 1.
DR InterPro; IPR018499; Tetraspanin/Peripherin.
DR InterPro; IPR000301; Tetraspanin_animals.
DR InterPro; IPR008952; Tetraspanin_EC2_sf.
DR PANTHER; PTHR19282; TETRASPANIN; 1.
DR PANTHER; PTHR19282:SF547; TETRASPANIN; 1.
DR Pfam; PF00335; Tetraspanin; 1.
DR PIRSF; PIRSF002419; Tetraspanin; 1.
DR PRINTS; PR00259; TMFOUR.
DR SUPFAM; SSF48652; Tetraspanin; 1.
PE 2: Evidence at transcript level;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU361218};
KW Transmembrane {ECO:0000256|RuleBase:RU361218};
KW Transmembrane helix {ECO:0000256|RuleBase:RU361218}.
FT TRANSMEM 12..36
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361218"
FT TRANSMEM 57..76
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361218"
FT TRANSMEM 88..110
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361218"
FT TRANSMEM 218..243
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361218"
SQ SEQUENCE 253 AA; 28210 MW; 278AA0AC22DB022F CRC64;
MASELCISVT KYFLFIFNLI FFLLGMVVLG LGVWIICSKE TFQLQLFSAH PYLSLSLFPY
LLVISGSVTL LLGFFGSLGA LKEVKCMLAT YFILLTVLLA AQIIGTVVIF TQKKAFEISL
EKYVKDMIAS FEMNNSTTQD LKKDLDVLQS QAQCCGWTGQ EDFREVPCSC YKTNATDNPT
NQGSGVCCKS ISNYTCVVYE KNCRDTITGW LHMHLMSILG VVLAVAVVEI CGTILSMCLY
NQATLDYSMP MYF
//
