ID W5UG40_ICTPU Unreviewed; 280 AA.
AC W5UG40;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=Four and a half LIM domains protein 2 {ECO:0000313|EMBL:AHH40961.1};
DE SubName: Full=Four and a half LIM domains protein 5 {ECO:0000313|RefSeq:XP_017331736.1};
GN Name=Fhl2 {ECO:0000313|EMBL:AHH40961.1};
GN Synonyms=fhl5 {ECO:0000313|RefSeq:XP_017331736.1};
OS Ictalurus punctatus (Channel catfish) (Silurus punctatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
OC Ictaluridae; Ictalurus.
OX NCBI_TaxID=7998 {ECO:0000313|EMBL:AHH40961.1};
RN [1] {ECO:0000313|EMBL:AHH40961.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Mixed {ECO:0000313|EMBL:AHH40961.1};
RX PubMed=23127152; DOI=10.1186/1471-2164-13-595;
RA Liu S., Zhang Y., Zhou Z., Waldbieser G., Sun F., Lu J., Zhang J.,
RA Jiang Y., Zhang H., Wang X., Rajendran K.V., Khoo L., Kucuktas H.,
RA Peatman E., Liu Z.;
RT "Efficient assembly and annotation of the transcriptome of catfish by RNA-
RT Seq analysis of a doubled haploid homozygote.";
RL BMC Genomics 13:595-595(2012).
RN [2] {ECO:0000313|RefSeq:XP_017331736.1}
RP IDENTIFICATION.
RC TISSUE=Blood {ECO:0000313|RefSeq:XP_017331736.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; JT415244; AHH40961.1; -; mRNA.
DR RefSeq; XP_017331736.1; XM_017476247.3.
DR STRING; 7998.ENSIPUP00000007804; -.
DR Ensembl; ENSIPUT00000008153; ENSIPUP00000007814; ENSIPUG00000005345.
DR GeneID; 108270008; -.
DR KEGG; ipu:108270008; -.
DR CTD; 9457; -.
DR OMA; ERCFNCA; -.
DR OrthoDB; 370973at2759; -.
DR Proteomes; UP000221080; Chromosome 9.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd09343; LIM1_FHL; 1.
DR CDD; cd09346; LIM3_FHL; 1.
DR CDD; cd09347; LIM4_FHL; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 4.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR24205; FOUR AND A HALF LIM DOMAINS PROTEIN; 1.
DR PANTHER; PTHR24205:SF7; FOUR AND A HALF LIM DOMAINS PROTEIN 5; 1.
DR Pfam; PF00412; LIM; 4.
DR SMART; SM00132; LIM; 4.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 5.
DR PROSITE; PS00478; LIM_DOMAIN_1; 3.
DR PROSITE; PS50023; LIM_DOMAIN_2; 3.
PE 2: Evidence at transcript level;
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 39..99
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 100..161
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 220..280
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
SQ SEQUENCE 280 AA; 32049 MW; 818E3E868E0C6B86 CRC64;
MSTERFDCHY CKDSLLGKKY ILKEDTQYCA KCYENLFANC CEGCSLPIGC NNKDLSYKDR
HWHENCFKCG RCGRSLAEKA FAAKDELLLC TECYSNEYSA KCANCAKTIL PGSRKMEYKG
NSWHETCFLC QRCQQPIGTK SFIPKDNSFF CVPCFEKQFA YQCCSCKKAI TTGGVTYNDK
PWHRECFTCI GCKRQLAGQR FTSRENFPYC LECFSNLYAK KCVGCSKPIT SLAGAKYVSF
EERQWHSECF TCMQCSVSLV GRGFLTQRDN VLCTDCGREK
//
