ID W5ULN6_ICTPU Unreviewed; 160 AA.
AC W5ULN6;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Transmembrane protein 50A {ECO:0000313|EMBL:AHH43084.1, ECO:0000313|RefSeq:XP_017319291.1};
GN Name=Tmem50a {ECO:0000313|EMBL:AHH43084.1};
GN Synonyms=tmem50a {ECO:0000313|RefSeq:XP_017319291.1};
OS Ictalurus punctatus (Channel catfish) (Silurus punctatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
OC Ictaluridae; Ictalurus.
OX NCBI_TaxID=7998 {ECO:0000313|EMBL:AHH43084.1};
RN [1] {ECO:0000313|EMBL:AHH43084.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Mixed {ECO:0000313|EMBL:AHH43084.1};
RX PubMed=23127152; DOI=10.1186/1471-2164-13-595;
RA Liu S., Zhang Y., Zhou Z., Waldbieser G., Sun F., Lu J., Zhang J.,
RA Jiang Y., Zhang H., Wang X., Rajendran K.V., Khoo L., Kucuktas H.,
RA Peatman E., Liu Z.;
RT "Efficient assembly and annotation of the transcriptome of catfish by RNA-
RT Seq analysis of a doubled haploid homozygote.";
RL BMC Genomics 13:595-595(2012).
RN [2] {ECO:0000313|RefSeq:XP_017319291.1}
RP IDENTIFICATION.
RC TISSUE=Blood {ECO:0000313|RefSeq:XP_017319291.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the UPF0220 family.
CC {ECO:0000256|ARBA:ARBA00005335}.
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DR EMBL; JT419457; AHH43084.1; -; mRNA.
DR RefSeq; XP_017319291.1; XM_017463802.3.
DR Ensembl; ENSIPUT00000030744; ENSIPUP00000029547; ENSIPUG00000019986.
DR GeneID; 108263216; -.
DR CTD; 23585; -.
DR OrthoDB; 5392709at2759; -.
DR Proteomes; UP000221080; Chromosome 3.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR007919; UPF0220.
DR PANTHER; PTHR13180; SMALL MEMBRANE PROTEIN-RELATED; 1.
DR PANTHER; PTHR13180:SF1; TRANSMEMBRANE PROTEIN 50A; 1.
DR Pfam; PF05255; UPF0220; 1.
PE 2: Evidence at transcript level;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 26..49
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 55..77
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 98..123
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 129..150
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 160 AA; 17706 MW; 719411633C95DB4A CRC64;
MSGFLDGIRC GECECNIDWA EKRNTIASIA AGVLFFTGWW IIIDAAIMYP KEEQFHHAYH
TCGVIATIAF LMINAVSNGQ VRGDSYSDGC IGQTGARVWL FIGFMLAFGS LIASMWILFG
GFVVPAKEAV YPGIAVFFQN AFIFFGGLVF KFGRTEDLWQ
//
