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Database: UniProt
Entry: W6MFS3_9ASCO
LinkDB: W6MFS3_9ASCO
Original site: W6MFS3_9ASCO 
ID   W6MFS3_9ASCO            Unreviewed;      1702 AA.
AC   W6MFS3;
DT   16-APR-2014, integrated into UniProtKB/TrEMBL.
DT   16-APR-2014, sequence version 1.
DT   24-JAN-2024, entry version 39.
DE   RecName: Full=S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126};
GN   ORFNames=KUCA_T00000444001 {ECO:0000313|EMBL:CDK24481.1};
OS   Kuraishia capsulata CBS 1993.
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetales incertae sedis; Kuraishia.
OX   NCBI_TaxID=1382522 {ECO:0000313|EMBL:CDK24481.1};
RN   [1] {ECO:0000313|EMBL:CDK24481.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CBS 1993 {ECO:0000313|EMBL:CDK24481.1};
RA   Genoscope - CEA;
RL   Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CDK24481.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CBS 1993 {ECO:0000313|EMBL:CDK24481.1};
RA   Morales L., Noel B., Porcel B., Marcet-Houben M., Hullo M-F., Sacerdot C.,
RA   Tekaia F., Leh-Louis V., Despons L., Khanna V., Aury J-M., Barbe V.,
RA   Couloux A., Labadie K., Pelletier E., Souciet J-L., Boekhout T.,
RA   Gabaldon T., Wincker P., Dujon B.;
RT   "Complete DNA sequence of /Kuraishia capsulata/ illustrates novel genomic
RT   features among budding yeasts (/Saccharomycotina/).";
RL   Submitted (FEB-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC       {ECO:0000256|ARBA:ARBA00004604}.
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DR   EMBL; HG793125; CDK24481.1; -; Genomic_DNA.
DR   STRING; 1382522.W6MFS3; -.
DR   HOGENOM; CLU_000845_0_0_1; -.
DR   OrthoDB; 167902at2759; -.
DR   GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR   CDD; cd05702; S1_Rrp5_repeat_hs11_sc8; 1.
DR   CDD; cd05693; S1_Rrp5_repeat_hs1_sc1; 1.
DR   CDD; cd05706; S1_Rrp5_repeat_sc10; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 10.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   InterPro; IPR003107; HAT.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR045209; Rrp5.
DR   InterPro; IPR048058; Rrp5_S1_rpt_hs11_sc8.
DR   InterPro; IPR048059; Rrp5_S1_rpt_hs1_sc1.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR23270; PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5; 1.
DR   PANTHER; PTHR23270:SF10; PROTEIN RRP5 HOMOLOG; 1.
DR   Pfam; PF00575; S1; 4.
DR   SMART; SM00386; HAT; 6.
DR   SMART; SM00316; S1; 13.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 11.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS50126; S1; 11.
DR   PROSITE; PS50005; TPR; 1.
PE   4: Predicted;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   rRNA processing {ECO:0000256|ARBA:ARBA00022552};
KW   TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT   DOMAIN          101..208
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          224..289
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          408..475
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          492..564
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          585..654
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          668..747
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          770..839
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          867..943
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          1059..1128
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          1146..1214
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   DOMAIN          1234..1305
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   REPEAT          1561..1594
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REGION          1..30
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          143..171
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1323..1389
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1401..1437
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        146..165
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1336..1360
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1374..1389
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1412..1429
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1702 AA;  189028 MW;  BBC9CAF44F121546 CRC64;
     MSVSQKRKRS DSQTESKTSI DSTEISFPRG GGSVLTALEV KEISNEATRD VLFESKKQHQ
     ASAGVVKKRK GTKGTAVKVA TVEKEKDVTV DHLDFKTLVP GSQVLGQIVQ INKMDLVISI
     ADNLVGFVPI TSISQEITEQ LEALQESVES SDEDSEEEED NEEEEPDKKN FPNLSEIFQL
     GQWLRATVIT NETKTKKKSK KRLELSIEPS IVNSNVAEDD ITQGAIIQVS VKSVEDHGVI
     LNTGKGTNGF ISKKELDAGL VNIQDLHPGS VILVSIASIN SRTITCKIPH GQLKKQGSVS
     TIDSITSIIP GMLVDALITG LKKDGIVAKV FGLADSSIGM THLGVYDFSK LKEKHQIGSK
     IKARVIASFV LRGEAKLILS TLPHVLFLNK ESWDKETKSA PLESYPIGKV VDVTIIGKDG
     TYIYTQVEGS LLGQVHYSRV SAKADLDMDF KIGSEHKARV LGYSWADNAL TLTLDKKQIE
     QKYLRVQDIP IGEAVVGEVV RLITDNGLIL KIFDDFEAFV PRSHMSDIKL IYPERKFKIG
     SMVKARVLKL MYKRGKASIL CTLKKSLVVT EDEDIVASFE DAQIGKRTPA TVERMQPNGC
     IVAMFGQMKA FLPNSEISET FVKRPEDHLR LGQTIRVRII SSDSEAKRTV VSCRISDSLS
     QTQLSAIEEM IPGKSVIKVS VVEKEKDNAI VEMEDSGLRG IIAFGHLSDK NYEQNRALLK
     KTEIGSTLEA VVLMKDRKSR ILTLSAKESL VKAAKEGLLP ASFEEISIAP TTLHGFVSGI
     TNSGVFVAFA NKLTGLVLPK YASDKFVDNL NSLFYVSQSV SCHVIRTDIE NKRFLLSLKS
     KETDKDSEPA INPVDSKVKT ISEFVPGLIT KAQIKGIKAT QLNVQLADNQ QGRIDVTQLF
     DSYDDIKNPK RPTDQFKKGD VIDVKIIGFH DTRNHKFLPV TNRKTKQVVL ELSAKKSDLG
     LGAVKPLTLS NVKEGEKHLV FINNSARGFL WAGISPVIKG KLSLMDLCDD ASLLENLEEE
     FPVGCALMAT IKEIEVENAT VTFSARSKPI HSIADISVGD VVPAKVLKTR ESYLLIQLCD
     TVNAISFITD ALNDYSEKLD SVFSTNDICA AKVLEIDSDS SKVYVSVRTQ DTKDKLITSL
     EDVKRGDVLR GFVKAVTDKG VLIALGRNIH AFVKVSDLSD SYIKEWKKTF HVHDPVQGKI
     IEAKEESRIL MTLKDSEVNG ELNTLKRFED VEVGEIYEGS VRRITDFGVF VKLDGTLNIT
     GLCHHSEISD KKISSIESVF GEGDRVKVKL LAKDDAKKQL SLGMKASYFI DEVAADEDIE
     MEDNAVESSE QSEEEKVGDN DSEDELMEEA YAEQESGESD SESDKEVSKE SAGPEAQVKS
     QGGLSTNGFD WTASILDQTM ANDESSDEED MDDEKPQKKK RRASVVKDKT AEMNTRAPQS
     VSDFERLLIG NPNSSILWMN YMSFQLQLSE IEKAREIGSR ALNTINYREE QEKLNIWIAL
     LNLENSFGSD ETLEDTFKRA CQYMDSFTIH QKLVGIFSIS ERNDKAEELL KTMTKKFGSE
     VSVWVSYASF LLDAGRHDDA REVLARALQV LPKRSHIETV RKFAQLEFSK GDSEQGRSLF
     EGLITDAAKR IDLWNVYIDQ EIKRGEKAKA EMLFERVLNR KLSRTQAKFF FNKWLNLEED
     KGDDKGAEYV KAKAAEYAQN NQ
//
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