ID W6TKX8_9SPHI Unreviewed; 411 AA.
AC W6TKX8;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=ATPase AAA {ECO:0000313|EMBL:ETZ19652.1};
GN ORFNames=N824_09280 {ECO:0000313|EMBL:ETZ19652.1};
OS Pedobacter sp. V48.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=509635 {ECO:0000313|EMBL:ETZ19652.1, ECO:0000313|Proteomes:UP000019145};
RN [1] {ECO:0000313|EMBL:ETZ19652.1, ECO:0000313|Proteomes:UP000019145}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=V48 {ECO:0000313|EMBL:ETZ19652.1,
RC ECO:0000313|Proteomes:UP000019145};
RX PubMed=24578271;
RA Bitzer A.S., Garbeva P., Silby M.W.;
RT "Draft Genome Sequence of Pedobacter sp. Strain V48, Isolated from a
RT Coastal Sand Dune in the Netherlands.";
RL Genome Announc. 2:e00094-e00014(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETZ19652.1}.
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DR EMBL; AWRU01000033; ETZ19652.1; -; Genomic_DNA.
DR RefSeq; WP_048907791.1; NZ_AWRU01000033.1.
DR AlphaFoldDB; W6TKX8; -.
DR STRING; 509635.N824_09280; -.
DR PATRIC; fig|509635.5.peg.5132; -.
DR eggNOG; COG2204; Bacteria.
DR OrthoDB; 9767722at2; -.
DR Proteomes; UP000019145; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF120; L-LYSINE AMINOMUTASE REGULATOR; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..241
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 411 AA; 46333 MW; E042ADBF6555B81C CRC64;
MDVQDIKNRF GIIGGSPLLN RAIDIARQVA PTDMSVLITG ESGSGKEVFS HIIHQMSTRK
HGAFIAVNCG AIPEGTIDSE LFGHEKGSFT GAHEARKGYF EVANGGTIFL DEVAELPLGT
QARLLRILES GEYLRVGSSK VQKTDVRIIA ATNVDVYNRV KSGKFREDLY YRLNTVPLRI
PALHERKEDI YLLFRKFSAD FSDKYRSPGI QLEPEAIQIL SNYSWPGNVR QLKNIAEQIC
VLEKDRNVTA AALLNYIPNE SATNLPVAIN GNTKEDYTER DILYKVLFDM KKDMMELKKL
VAEIIQSGGN TSHIMADNPH YINQLYQEVD QTYGNEQPTL TIKKPVQNAP VDYNYTHEAE
EVEESLSLID KESDLIKKAL KKHKGKRKFA AQELGISERT LYRKIKELNL N
//
