ID   W6ZVA5_9APIC            Unreviewed;       265 AA.
AC   W6ZVA5;
DT   16-APR-2014, integrated into UniProtKB/TrEMBL.
DT   16-APR-2014, sequence version 1.
DT   27-MAR-2024, entry version 35.
DE   SubName: Full=DNA-directed RNA polymerase II subunit RPB9 {ECO:0000313|EMBL:EUD64727.1};
GN   ORFNames=C922_04871 {ECO:0000313|EMBL:EUD64727.1};
OS   Plasmodium inui San Antonio 1.
OC   Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida;
OC   Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).
OX   NCBI_TaxID=1237626 {ECO:0000313|EMBL:EUD64727.1, ECO:0000313|Proteomes:UP000030640};
RN   [1] {ECO:0000313|EMBL:EUD64727.1, ECO:0000313|Proteomes:UP000030640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=San Antonio 1 {ECO:0000313|EMBL:EUD64727.1,
RC   ECO:0000313|Proteomes:UP000030640};
RG   The Broad Institute Genome Sequencing Platform;
RG   The Broad Institute Genome Sequencing Center for Infectious Disease;
RA   Neafsey D., Cheeseman I., Volkman S., Adams J., Walker B., Young S.K.,
RA   Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L.,
RA   Arachchi H.M., Berlin A.M., Chapman S.B., Dewar J., Goldberg J., Griggs A.,
RA   Gujja S., Hansen M., Howarth C., Imamovic A., Larimer J., McCowan C.,
RA   Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T.,
RA   Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT   "The Genome Sequence of Plasmodium inui San Antonio 1.";
RL   Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC       {ECO:0000256|ARBA:ARBA00004604}.
CC   -!- SIMILARITY: Belongs to the archaeal RpoM/eukaryotic RPA12/RPB9/RPC11
CC       RNA polymerase family. {ECO:0000256|ARBA:ARBA00008925}.
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DR   EMBL; KI965490; EUD64727.1; -; Genomic_DNA.
DR   RefSeq; XP_008818667.1; XM_008820445.1.
DR   AlphaFoldDB; W6ZVA5; -.
DR   EnsemblProtists; EUD64727; EUD64727; C922_04871.
DR   GeneID; 20040145; -.
DR   VEuPathDB; PlasmoDB:C922_04871; -.
DR   OrthoDB; 19808at2759; -.
DR   Proteomes; UP000030640; Unassembled WGS sequence.
DR   GO; GO:0005665; C:RNA polymerase II, core complex; IEA:UniProt.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   CDD; cd10508; Zn-ribbon_RPB9; 1.
DR   Gene3D; 2.20.25.10; -; 2.
DR   InterPro; IPR019761; DNA-dir_RNA_pol-M_15_CS.
DR   InterPro; IPR001529; DNA-dir_RNA_pol_M/15kDasu.
DR   InterPro; IPR012164; Rpa12/Rpb9/Rpc10/TFS.
DR   InterPro; IPR034012; Zn_ribbon_RPB9_C.
DR   InterPro; IPR001222; Znf_TFIIS.
DR   PANTHER; PTHR11239; DNA-DIRECTED RNA POLYMERASE; 1.
DR   PANTHER; PTHR11239:SF1; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9; 1.
DR   Pfam; PF02150; RNA_POL_M_15KD; 1.
DR   Pfam; PF01096; TFIIS_C; 1.
DR   SMART; SM00661; RPOL9; 1.
DR   SUPFAM; SSF57783; Zinc beta-ribbon; 2.
DR   PROSITE; PS01030; RNA_POL_M_15KD; 1.
DR   PROSITE; PS51133; ZF_TFIIS_2; 1.
PE   3: Inferred from homology;
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW   ECO:0000313|EMBL:EUD64727.1};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00472}.
FT   DOMAIN          75..116
FT                   /note="TFIIS-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51133"
FT   REGION          124..265
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        124..140
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        198..254
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   265 AA;  30588 MW;  E48AE7DDBEBBDE79 CRC64;
     MAEVTFCEEC NNILYARSDR KNKKLLYVCR SCDYISHKPN EQQNIVARIN YNYNRKEDVY
     IHPETKNDPA LGRVREWICK NCGNNEAVFL QLPERISSNP MALIYVCTGK NCHYWEKEIQ
     FTNDEEDPLH RSRRSSEASH VDHLNPSVKQ EGGNAQGIIP VQGQKRSRKK IMRGRQHHDD
     SDEPDGEEHD GEEHEGEEHE GEEHNGDGPQ GNSLDDRDEK EEDKLKKELQ ELIDAKDEGQ
     LQPGDQHSEP GDSADENESD VEDYF
//