ID W7QRH9_9ALTE Unreviewed; 926 AA.
AC W7QRH9;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=alpha-L-rhamnosidase {ECO:0000256|ARBA:ARBA00012652};
DE EC=3.2.1.40 {ECO:0000256|ARBA:ARBA00012652};
GN ORFNames=DS2_07638 {ECO:0000313|EMBL:EWH10488.1};
OS Catenovulum agarivorans DS-2.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Alteromonadaceae; Catenovulum.
OX NCBI_TaxID=1328313 {ECO:0000313|EMBL:EWH10488.1, ECO:0000313|Proteomes:UP000019276};
RN [1] {ECO:0000313|EMBL:EWH10488.1, ECO:0000313|Proteomes:UP000019276}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DS-2 {ECO:0000313|EMBL:EWH10488.1,
RC ECO:0000313|Proteomes:UP000019276};
RX PubMed=24604650;
RA Shan D., Li X., Gu Z., Wei G., Gao Z., Shao Z.;
RT "Draft Genome Sequence of the Agar-Degrading Bacterium Catenovulum sp.
RT Strain DS-2, Isolated from Intestines of Haliotis diversicolor.";
RL Genome Announc. 2:e00144-14(2014).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Hydrolysis of terminal non-reducing alpha-L-rhamnose residues
CC in alpha-L-rhamnosides.; EC=3.2.1.40;
CC Evidence={ECO:0000256|ARBA:ARBA00001445};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EWH10488.1}.
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DR EMBL; ARZY01000011; EWH10488.1; -; Genomic_DNA.
DR AlphaFoldDB; W7QRH9; -.
DR STRING; 1328313.DS2_07638; -.
DR PATRIC; fig|1328313.3.peg.1559; -.
DR eggNOG; COG3408; Bacteria.
DR OrthoDB; 9761045at2; -.
DR Proteomes; UP000019276; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0030596; F:alpha-L-rhamnosidase activity; IEA:UniProtKB-EC.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 1.50.10.10; -; 1.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 2.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 2.60.420.10; Maltose phosphorylase, domain 3; 1.
DR InterPro; IPR008928; 6-hairpin_glycosidase_sf.
DR InterPro; IPR012341; 6hp_glycosidase-like_sf.
DR InterPro; IPR016007; Alpha_rhamnosid.
DR InterPro; IPR035396; Bac_rhamnosid6H.
DR InterPro; IPR035398; Bac_rhamnosid_C.
DR InterPro; IPR013737; Bac_rhamnosid_N.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR008902; Rhamnosid_concanavalin.
DR PANTHER; PTHR33307; ALPHA-RHAMNOSIDASE (EUROFUNG); 1.
DR PANTHER; PTHR33307:SF6; ALPHA-RHAMNOSIDASE (EUROFUNG)-RELATED; 1.
DR Pfam; PF05592; Bac_rhamnosid; 1.
DR Pfam; PF17389; Bac_rhamnosid6H; 1.
DR Pfam; PF17390; Bac_rhamnosid_C; 1.
DR Pfam; PF08531; Bac_rhamnosid_N; 1.
DR PIRSF; PIRSF010631; A-rhamnsds; 1.
DR SUPFAM; SSF48208; Six-hairpin glycosidases; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000019276};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..31
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 191..360
FT /note="Bacterial alpha-L-rhamnosidase N-terminal"
FT /evidence="ECO:0000259|Pfam:PF08531"
FT DOMAIN 373..470
FT /note="Alpha-L-rhamnosidase concanavalin-like"
FT /evidence="ECO:0000259|Pfam:PF05592"
FT DOMAIN 480..822
FT /note="Alpha-L-rhamnosidase six-hairpin glycosidase"
FT /evidence="ECO:0000259|Pfam:PF17389"
FT DOMAIN 825..893
FT /note="Alpha-L-rhamnosidase C-terminal"
FT /evidence="ECO:0000259|Pfam:PF17390"
SQ SEQUENCE 926 AA; 104819 MW; AEEAE7C86C218D88 CRC64;
MDRLRVLSRT YKLYVMLVGF CWLLASCSFS FEQFSNNDAP VELKVGEGFV NPIGYYEAKP
RFSWKIASSS VQNTQSAYQI QVGSAVEQGE SFKANLWDSG KVASADNAWI RYAGQPLVSR
QQLLWRVRIW DENKQASNWS ELNRVELGLL SNQDWQAEWI AHPDTLQVNK PSQKTIATAQ
YFRKRFSAEN SIQQARLYVT AKGLFKAFIN GQMVAPDDAM TPGWTPYAKR IETLTYDVTD
LLSQGENVLA ANLAGGWYAG RVFKFTDKEH KVTPEFLAQL EIIDENGLRQ VITTDNSWRV
TQQGPIRFSS IYDGELYDQN KQMSSWAQVQ FDDSAWQTAA ANQLDFKVQL APKRHAPIRN
VASLEPVSII TNNNKAVIFD FGQNMVGVPK INVPALANQA ITIRFAEALH KGEFYTENYR
SAKSTDIFIP AADGIAEYQP RFTYHGYRYV EISGFDPNAA PSKSWVTAVV QHSDVEVEQN
FVTSHAKLNK LAQNIRWGLK SNFYDIPLDC PQRDERLGWT GDAQVFTTPS MYMADVYAFW
AAWLQSVREE QFEDGGVPLY IPFVEWINWP SSGWGDAATI IPWELYQMTG DTSILADNYT
MMTRWLDYHK SQSDELISSM KTFGDWLQPY PDPAAKNPNR GDTRFDLIST AYFARSVYLT
AQTASVLDKS ADATRYLALF ERIKHAFVHH FFDEKLNVKQ GQSTQTTYLL GLAFDLFTGE
QVAIAQHKLI ELIEQADGHL RTGFLGTPLL AQVLQEAGRS DIVYDLIFKE TYPSWFYSIN
NGATTTWERW NSYSIKDGFN PEGMNSLNHY AYGSIAQWFY QGILGIRAKV AGFKQVEIKP
QVLGQLDSAE GFYDTPAGRI KVSWQLNLQQ FTMNVSIPKN TSADVVIPAF RANTLMINQQ
SGKSADLSNL QPGEYQISAA LTRQAP
//
