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Database: UniProt
Entry: W7TI10_9STRA
LinkDB: W7TI10_9STRA
Original site: W7TI10_9STRA 
ID   W7TI10_9STRA            Unreviewed;      1504 AA.
AC   W7TI10;
DT   16-APR-2014, integrated into UniProtKB/TrEMBL.
DT   16-APR-2014, sequence version 1.
DT   27-MAR-2024, entry version 32.
DE   RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE            EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN   ORFNames=Naga_100001g100 {ECO:0000313|EMBL:EWM26630.1};
OS   Nannochloropsis gaditana.
OC   Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae;
OC   Eustigmatales; Monodopsidaceae; Nannochloropsis.
OX   NCBI_TaxID=72520 {ECO:0000313|EMBL:EWM26630.1, ECO:0000313|Proteomes:UP000019335};
RN   [1] {ECO:0000313|EMBL:EWM26630.1, ECO:0000313|Proteomes:UP000019335}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=B-31 {ECO:0000313|EMBL:EWM26630.1,
RC   ECO:0000313|Proteomes:UP000019335};
RX   PubMed=23966634; DOI=10.1093/mp/sst120;
RA   Corteggiani Carpinelli E., Telatin A., Vitulo N., Forcato C., D'Angelo M.,
RA   Schiavon R., Vezzi A., Giacometti G.M., Morosinotto T., Valle G.;
RT   "Chromosome Scale Genome Assembly and Transcriptome Profiling of
RT   Nannochloropsis gaditana in Nitrogen Depletion.";
RL   Mol. Plant 7:323-335(2014).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC         Evidence={ECO:0000256|ARBA:ARBA00001556};
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family. DEAH subfamily.
CC       PRP16 sub-subfamily. {ECO:0000256|ARBA:ARBA00038040}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EWM26630.1}.
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DR   EMBL; AZIL01000609; EWM26630.1; -; Genomic_DNA.
DR   EnsemblProtists; EWM26630; EWM26630; Naga_100001g100.
DR   OrthoDB; 5488182at2759; -.
DR   Proteomes; UP000019335; Chromosome 8.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   CDD; cd18791; SF2_C_RHA; 1.
DR   Gene3D; 1.20.120.1080; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR048333; HA2_WH.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR   PANTHER; PTHR18934:SF91; PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE PRP16; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF21010; HA2_C; 1.
DR   Pfam; PF04408; HA2_N; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Helicase {ECO:0000313|EMBL:EWM26630.1};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000019335}.
FT   DOMAIN          824..987
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          1001..1186
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          170..585
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          597..643
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          752..780
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1467..1504
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        215..287
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        297..313
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        320..390
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        398..435
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        503..523
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        538..552
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        606..633
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1467..1483
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1504 AA;  168851 MW;  B406D60D9118CC99 CRC64;
     MRSRVLSLSG AHECRETQAV KCSVRPHLLP LLLLQLERFT GSAWRHLPKL GRVRPVMTDI
     DAGRVKAAQE ATLRDEALVM RVASEVAQAL KLPGKNVTLG RKLVRLGLTH ADSVDGFCAE
     ALQLAPISSS LLQEVHHTLR QRYRQAYATA GEQAGETAAK QITGVGRTMD GFVMSPSKHL
     PGGSQQASKE EKPVFFKPQT KDNASPVERK SMLGLDRLAA MKRAEKETTK DTWSGGKPVV
     KKEEREGEEG GKGGPRPEDA ARRKSDFHRS STKAADRSYR PRREPDTPSH PGGVNVEARR
     GLEERERGRG RGGGVAVGER GRGRVEDRDG RSNGDRKRDG KGVYLSGRGE EERSRRRGRD
     REEEERQRRR SEGRPRENGR RDREGRGSRS RSRSPGYTWK RHRGERRERG SSRSEREAQE
     GSEGGRSRRR EAEGGGGPSG RWGEYGPPTP SRSGLGLDED EWEAPENLQS VRRPSLTPGA
     TPLASPRATP RASLYGRPSD DPGEAAWEVE ERREGRRGDR GTGSESIRPA VPETPFDWRA
     AMREDGREAA YVADGRKPGG PDARPGSSLR QRQRGRKEED EEDEEYYEAF YLAEEGVSRG
     EDLFGGDPAT LREKEEAMRK LQERNEANKR RQQQNTRKNQ LAADQNAWEE NRLLTSGVAV
     RNEVDTDLAD EEETRVRLNV HHTKPPFIDG RVTFSRQLTT VSVVKEPTSD MAILSKKGSA
     LVRERRERRE RGKMRQRFWE LGGSRMGQAM GLKEEGEEAK EGGAGASGEG PGKEEEEYDY
     RKESKFSEHL KDMKKEGQSD FSRSKSMAEQ RQYLPISTVR DELLTVIREN PIVIIVGETG
     SGKTTQMTQY LHEEGFTDLG MVACTQPRRV AATTVAMRVA DEMGVELGEE VGYSIRFDDC
     TSDKTLIKYM TDGILLRESL REPDLDSYAA IVMDEAHERS LNTDVLFGML RKVAQRRRDL
     KLIVTSATLD SKRFSDFFGG VPVFEIPGRT FPVERVYAKT SVEDYVDAAV KQALAIHLSH
     PPGDILVFMT GQEDIETVCE VIAERMMDLG TDRVPPLLLL PLFSNLSSDQ QSKAFEATEK
     AVRKCVVSTN IAETSVTVDG VKYVIDCGFS KLKVYNPSIG MDSLLVTPVA QANSDQRAGR
     AGRTGPGHCY RLYTERQYRD ELLKTQVPEI QRTNLANVVL LLKSLGVTDL KEFDFMDPPP
     QENLQNSMYQ LWILGALDNT GQLTTLGRKM AEFPIDPPLA KMLIVSHDLR CSEEVLIVVS
     MLSAPPVFFR PKDRAEESDA KREKFFVPES DHLTHLNVYL QWKKNRYSAP WCTEHFLHAK
     SLKKAREIHG QLSDIMQSQR MPLHAAGNSN WDRVRKAICS AYFYNSALMK GLGDYRNLLT
     GIPCHVHPTS ALAGLGYTPD YVTYHELVMT SKSFMQCITA IEPEWLAELG PAFFSLHESS
     TNRMARRREE KELKDSMEAE MQAALKREEE EKAARKAAQV KETPKHVGSR MQTPGRWTPR
     RVGL
//
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