ID W7TLD7_9STRA Unreviewed; 2463 AA.
AC W7TLD7;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE SubName: Full=Fg-gap repeat domain protein {ECO:0000313|EMBL:EWM21519.1};
DE Flags: Fragment;
GN ORFNames=Naga_100204g1 {ECO:0000313|EMBL:EWM21519.1};
OS Nannochloropsis gaditana.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae;
OC Eustigmatales; Monodopsidaceae; Nannochloropsis.
OX NCBI_TaxID=72520 {ECO:0000313|EMBL:EWM21519.1, ECO:0000313|Proteomes:UP000019335};
RN [1] {ECO:0000313|EMBL:EWM21519.1, ECO:0000313|Proteomes:UP000019335}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B-31 {ECO:0000313|EMBL:EWM21519.1,
RC ECO:0000313|Proteomes:UP000019335};
RX PubMed=23966634; DOI=10.1093/mp/sst120;
RA Corteggiani Carpinelli E., Telatin A., Vitulo N., Forcato C., D'Angelo M.,
RA Schiavon R., Vezzi A., Giacometti G.M., Morosinotto T., Valle G.;
RT "Chromosome Scale Genome Assembly and Transcriptome Profiling of
RT Nannochloropsis gaditana in Nitrogen Depletion.";
RL Mol. Plant 7:323-335(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EWM21519.1}.
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DR EMBL; AZIL01002464; EWM21519.1; -; Genomic_DNA.
DR EnsemblProtists; EWM21519; EWM21519; Naga_100204g1.
DR OrthoDB; 3816176at2759; -.
DR Proteomes; UP000019335; Unassembled WGS sequence.
DR GO; GO:0008305; C:integrin complex; IEA:InterPro.
DR GO; GO:0007155; P:cell adhesion; IEA:InterPro.
DR CDD; cd00603; IPT_PCSR; 3.
DR Gene3D; 2.60.40.10; Immunoglobulins; 3.
DR Gene3D; 2.130.10.130; Integrin alpha, N-terminal; 3.
DR Gene3D; 2.10.50.10; Tumor Necrosis Factor Receptor, subunit A, domain 2; 1.
DR InterPro; IPR013517; FG-GAP.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR013519; Int_alpha_beta-p.
DR InterPro; IPR000413; Integrin_alpha.
DR InterPro; IPR028994; Integrin_alpha_N.
DR InterPro; IPR002909; IPT_dom.
DR InterPro; IPR010308; TRP_C.
DR PANTHER; PTHR11319; G PROTEIN-COUPLED RECEPTOR-RELATED; 1.
DR PANTHER; PTHR11319:SF35; OUTER MEMBRANE PROTEIN PMPC-RELATED; 1.
DR Pfam; PF01839; FG-GAP; 3.
DR Pfam; PF01833; TIG; 3.
DR Pfam; PF06011; TRP; 1.
DR PRINTS; PR01185; INTEGRINA.
DR SMART; SM01411; Ephrin_rec_like; 1.
DR SMART; SM00191; Int_alpha; 6.
DR SMART; SM00429; IPT; 3.
DR SUPFAM; SSF81296; E set domains; 3.
DR SUPFAM; SSF69318; Integrin alpha N-terminal domain; 2.
DR PROSITE; PS51470; FG_GAP; 4.
PE 4: Predicted;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000019335};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..41
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 42..2463
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004904371"
FT TRANSMEM 1275..1295
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1415..1435
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1486..1507
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1911..1931
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1962..1982
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 2018..2050
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 2062..2081
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 2093..2118
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 2139..2161
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 2173..2192
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 2379..2401
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 2413..2431
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 130..191
FT /note="FG-GAP"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT REPEAT 201..259
FT /note="FG-GAP"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT REPEAT 269..330
FT /note="FG-GAP"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT REPEAT 359..420
FT /note="FG-GAP"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT DOMAIN 661..748
FT /note="IPT/TIG"
FT /evidence="ECO:0000259|SMART:SM00429"
FT DOMAIN 765..853
FT /note="IPT/TIG"
FT /evidence="ECO:0000259|SMART:SM00429"
FT DOMAIN 854..939
FT /note="IPT/TIG"
FT /evidence="ECO:0000259|SMART:SM00429"
FT REGION 1562..1600
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1617..1705
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1737..1877
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1643..1692
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1782..1823
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 2463
FT /evidence="ECO:0000313|EMBL:EWM21519.1"
SQ SEQUENCE 2463 AA; 264175 MW; 84A87329376094B4 CRC64;
MSCWSAFAAL AKAKRGMEKR LVPWSFLFLV LLSLTIRTSV GPPINPTQDE LLLPIVKETV
KVNLGPSDSK DYRGSALCHA GDLDGNGVDD LVLGAYGDDT TANNAGAIMI LYLRKDVVNP
LISWRKITSG TGGFNTRLQA LDYFGAAVAG AGDINGDSVP DLVVGALGDD EAALNAGAIY
LLYMQRVQAS PVASSVKITG GKGGFDATLA QNSYFGSSVA YLGDVDGNGV GDIAVGAYGE
DTLAGVVYIL FLQNSAAVPV VGWYKLRAQT PGFPFALAPN DAFGASVAGI GDLNGDGVPD
MAVGAYMDSE YQPGCGAVYV ILLQRPLGGR EAVGGLAGGG MVPADGSPVK GSSKITPGKH
GFGDTSLQAN AYFGASMAGF HDLDMDGVPE LVVGTIGDSR ANPNAGSVHL LFLGLNSTED
GLPMVREWRK ITTGLEGFES QLPANTNFGA ALAELPDLNG DNETELAIGC YVASNASVYI
VYKNSLTSVM ESPPQIYLVS PALLDTQGGE VVSMALSLDV TTVDLSQPYE LEAFVGLSPC
LNPVLLPYGD ATALARAQKD ARAPGVVAAA VSAQGGVAAI PFAVQPGAVQ DLATSETDMP
VHPSLALMPF PAVLASETQR PFLLTCVSTA GVGAHVLAQA TISQGGADMP VSMANAASYT
PPVVSSIETT GTMARGGFDL RILGRHFGAD DFEPLVLIQD TPCQAVVWVS DSEVVCRGVP
PGLGEAQVQV SVGGQTSKPS PTAAFVYDSP LLKSWNVTEP MRVSLPVFGG YSVDLPFSPY
TGGKEELSLW GSNFGPAGTL TQVQLGPWEC ADARVIADDL ITCVTPPGVG KNLTIVVSLG
GFEVSLSPGF TYAAPLLVTV VPDTANTGGG DLVVMGRNFG HTSEGLQVSI GGEACREVKM
VYEHQLITCK YPPGTGKGLP MLVTVSDQSN SPPRAFNYAD SYGQRTVEAV FFLVGESLES
FGSNKQAVFE QVLLRAMEYD PTLSIADEAV HVCNVTSLAG LTASTVQSWN VSFQGRAYAP
NPSKQAVSID VDAEMGTLWD QGKEEDRRRA DTDVDKILME TPLAPSNAAR HPSEDVYQED
SILVSVDVTA ANAKIGSAIQ TWLMTPEKQA LLRDYLNTKD TGLRVMELQV IAASMTNDLY
CPPGQQQQDI GSNGEKACFL CPLGSYQPLR SKRPCQPCPL GTDCLQQGVF LPVPLPGYWR
QALSESEAIR TDPYFSTYRI YECNPKSVCL GGIYSNCTEG HLQGGPLCAI CEDGFYGDGG
GACNPCGSKR MIQTLVASVV LGAFLAFSIV LYFFVRPGTD IDEAVKSVQD SFLEGPGGRS
FSRDLNMSYF LSNSLSRHLA SRLSDLTDLP DIWSKAKISI TFFQILASLN VAYTVPWPQE
FRQFLHMLSF LNLNILNLPG MAYSCVQPVD YFAEFMVAVT LPFLLTLVLL VLYAVGLRRI
HKKVSSNIDV VKALEAQSAR MKHQLIRKMR AISVRMLRRR PLRRPVATNS LLSTALAASA
AAIPFPAKKN GAPTISLDRT EGTTVKMPPG TRVVATASDP PRDMKRDAAV LTWRSSSIPT
IEEESAEVVS PPSAASSPPT AEGHDPGMAF LPPSSTSLVS HTSAPVLDDW ASVMPHHAAV
PSRPPSPAAT SYAPSHPHTD VLQPRPSSPP GRLPLPQPAA SRFSPPPPSR TTPPLIAEPS
QSSPPPAPSS SFAPHRPHHA AQLPPFDISV PSYPLSHALP PQASPAVCSA VIDIFSPRPS
SDEGEKDRIL PDIPFPSAPA FPSDSSLTSL SSRPLPTLPP PQQQQQQFQQ QLQKAHKRAT
FSERVTSSSG EIVTISSEKS HSVVGPRENA AGAAGGLERK GETAVDGAKG AGTQASHART
EGPTLQSFES TGDDDEDESI LEIKHKLTLL EKQENVERFS VERYTSRMIT FWFWIILLIY
PAVSRVVLGA VNCRTLDNGR RYLVSDFTID CRSRYYLRYM PLIVLALAVY PVGIPVMFFL
LLKYRRNVHP WDENLSFLYK TYRRRYWWFE IYELLRKLFL TGLIIFIAAG TATQLAIACL
VCAVTMCLHL RLQPYEEQSD DSLQGFALAE ILLVTYCALL LKLDVTGDDE NHLHVFDVLL
LSTNAVVVFG IMPAAFYVQG RQYYDRFRAH LSLSLPSRMV RAAAHRLLVS LCLLLTLFPA
ISNFSSPLLT FKLTFFVAAM LFYNTLLFLY FLPWSHVRFF PPRYRIIAVL APQNCHLEEA
AKRGGWSGLS ESMQGKGNFS KLNARKLEAI EAAGLSMAQL SQSRFRRRTE SGGEGGREGG
REGEVVVRRL SSLDSSVTQS GKDVGGGGMM GRGKALDKRE LYGAGQDEVG PDPSPLNRLL
LTPYMLLVRH RRALDPICAV LVVDLAVTCA REGEGRGNYA CIVMLALAGF FTLGLCGWAH
ITDKHPPLLS ALRIGQLAFA LATMDVLFAA FTPLNNRPRA LATDGWGLAT EVGVVLVTAL
VRL
//
