ID W7Y4F6_9BACT Unreviewed; 1039 AA.
AC W7Y4F6;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE SubName: Full=TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:GAF05780.1};
GN ORFNames=JCM21142_104533 {ECO:0000313|EMBL:GAF05780.1};
OS Saccharicrinis fermentans DSM 9555 = JCM 21142.
OC Bacteria; Bacteroidota; Bacteroidia; Marinilabiliales; Marinilabiliaceae;
OC Saccharicrinis.
OX NCBI_TaxID=869213 {ECO:0000313|EMBL:GAF05780.1, ECO:0000313|Proteomes:UP000019402};
RN [1] {ECO:0000313|EMBL:GAF05780.1, ECO:0000313|Proteomes:UP000019402}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 21142 {ECO:0000313|EMBL:GAF05780.1,
RC ECO:0000313|Proteomes:UP000019402};
RA Starns D., Oshima K., Suda W., Iino T., Yuki M., Inoue J., Kitamura K.,
RA Iida T., Darby A., Hattori M., Ohkuma M.;
RT "Draft Genome Sequence of Cytophaga fermentans JCM 21142T, a Facultative
RT Anaerobe Isolated from Marine Mud.";
RL Genome Announc. 2:e00206-14(2014).
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004571}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004571}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC {ECO:0000256|RuleBase:RU003357}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAF05780.1}.
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DR EMBL; BAMD01000123; GAF05780.1; -; Genomic_DNA.
DR RefSeq; WP_044214337.1; NZ_KI912107.1.
DR AlphaFoldDB; W7Y4F6; -.
DR STRING; 869213.GCA_000517085_01107; -.
DR eggNOG; COG4206; Bacteria.
DR OrthoDB; 9768177at2; -.
DR Proteomes; UP000019402; Unassembled WGS sequence.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR Gene3D; 2.40.170.20; TonB-dependent receptor, beta-barrel domain; 1.
DR Gene3D; 2.170.130.10; TonB-dependent receptor, plug domain; 1.
DR InterPro; IPR008969; CarboxyPept-like_regulatory.
DR InterPro; IPR018247; EF_Hand_1_Ca_BS.
DR InterPro; IPR012910; Plug_dom.
DR InterPro; IPR037066; Plug_dom_sf.
DR InterPro; IPR023996; TonB-dep_OMP_SusC/RagA.
DR InterPro; IPR023997; TonB-dep_OMP_SusC/RagA_CS.
DR InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR NCBIfam; TIGR04056; OMP_RagA_SusC; 1.
DR NCBIfam; TIGR04057; SusC_RagA_signa; 1.
DR PANTHER; PTHR47322; SUSC HOMOLOG-RELATED; 1.
DR PANTHER; PTHR47322:SF22; TONB-DEPENDENT RECEPTOR SUSC; 1.
DR Pfam; PF13715; CarbopepD_reg_2; 1.
DR Pfam; PF07715; Plug; 1.
DR Pfam; PF00593; TonB_dep_Rec; 1.
DR SUPFAM; SSF49464; Carboxypeptidase regulatory domain-like; 1.
DR SUPFAM; SSF56935; Porins; 1.
DR PROSITE; PS00018; EF_HAND_1; 1.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003357};
KW Reference proteome {ECO:0000313|Proteomes:UP000019402};
KW Signal {ECO:0000256|SAM:SignalP};
KW TonB box {ECO:0000256|ARBA:ARBA00023077, ECO:0000256|RuleBase:RU003357};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT SIGNAL 1..27
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 28..1039
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004903965"
FT DOMAIN 120..227
FT /note="TonB-dependent receptor plug"
FT /evidence="ECO:0000259|Pfam:PF07715"
FT DOMAIN 432..1004
FT /note="TonB-dependent receptor-like beta-barrel"
FT /evidence="ECO:0000259|Pfam:PF00593"
SQ SEQUENCE 1039 AA; 115735 MW; F6E9CCF960B24CB1 CRC64;
MENKFKPMKS MGFLIAMLLF CSTVIFAQEL QVSGKVTDLG GDPLPGVAVV VKGTTVGTIT
GMNGEYHLNV ESEKVLVFSF IGMKTKEVAV GVNTLMNVIL EDETTDLEEV QVIAYGSQKK
VSVVGAITSV GNKDLVSTPT GSVANSLAGH VTGLASIQSS GQPGANDPDL YIRGISTLDA
STSTPLMMVD GVERDFMQLD PEEIESISIL KDASATAVYG IRGANGVILV TTKRGSVGKP
KISVSASMSM QQPTQLLDFA DSYTYATVYN KAQLNDGIAE DKLMFSQDAI DNFKTGENPL
VYPNTDWMDY LFKSFAKQHK ENVNITGGSK RVKYFVSLGF FSQDGMLEDF GSLDYDYNFG
YNRFNYRSNV DVEVTNTTTL ALTIGGRTED RVEPNTKEGM DQMWRQIYWA VPFSGSGVVD
DKYLVNGNNY IDLQKKDGLD PFYGRGFKEF NKNTLNFDIA LKQKLDFVTE GLRFGVKAAY
NTSYNHNKTR STSVRTYDPI FLKDAETNVS AEDPNAYDVV YKTSGSFGNL GYNEDTDKAR
NWYAEATLNY NRNFGLHAVG ALLLYNQRRN YYPEQYADLP TGYIGSAFRA TYAYNNRYLA
EINMGYNGSE QFDSKKRYGL FPAVSLGWVI TEEAFMQGQD ILSFLKIRGS YGLVGNDRLG
ANRFLYLPDA YDVSAGGYNF GIDVPQSLPG ASESRIGNPN LTWETAVKQN YGIDAKFFDN
QLSVNADFFI EDREDILVTR ATVPGYVAAT LPAVNLGEVN NKGGEIEVIW RQRLNGNFNY
FIKLNASHAK NKIIFKDEVR PNESYMAATG RAVGQHFGYQ TLGFWQEEHF DVDNEGSYTL
KPEFVSYQNP QPGDVRYKDR NNDGKIDTDD IGYVGYSNVP QTTLGASFGF EYKGFDFKTV
WAGATNVSRY LDDTYKVAFG ATKSRSLLQY MVDDAWTPET AYSATYPRIS ITGADRNMQK
SDLWVKDASY LRLKNLELGY TVKASFMNKL GLSNMRVYFS GYNLLTFSRL KMVDPEAKTG
SNSVYPVMRV YNLGLNLKF
//
