ID W7Y9L4_9BACT Unreviewed; 1016 AA.
AC W7Y9L4;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE SubName: Full=Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:GAF04193.1};
GN ORFNames=JCM21142_72890 {ECO:0000313|EMBL:GAF04193.1};
OS Saccharicrinis fermentans DSM 9555 = JCM 21142.
OC Bacteria; Bacteroidota; Bacteroidia; Marinilabiliales; Marinilabiliaceae;
OC Saccharicrinis.
OX NCBI_TaxID=869213 {ECO:0000313|EMBL:GAF04193.1, ECO:0000313|Proteomes:UP000019402};
RN [1] {ECO:0000313|EMBL:GAF04193.1, ECO:0000313|Proteomes:UP000019402}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 21142 {ECO:0000313|EMBL:GAF04193.1,
RC ECO:0000313|Proteomes:UP000019402};
RA Starns D., Oshima K., Suda W., Iino T., Yuki M., Inoue J., Kitamura K.,
RA Iida T., Darby A., Hattori M., Ohkuma M.;
RT "Draft Genome Sequence of Cytophaga fermentans JCM 21142T, a Facultative
RT Anaerobe Isolated from Marine Mud.";
RL Genome Announc. 2:e00206-14(2014).
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004571}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004571}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC {ECO:0000256|RuleBase:RU003357}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAF04193.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BAMD01000039; GAF04193.1; -; Genomic_DNA.
DR RefSeq; WP_044213554.1; NZ_KI912107.1.
DR AlphaFoldDB; W7Y9L4; -.
DR STRING; 869213.GCA_000517085_01604; -.
DR eggNOG; COG4771; Bacteria.
DR OrthoDB; 1109428at2; -.
DR Proteomes; UP000019402; Unassembled WGS sequence.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR Gene3D; 2.40.170.20; TonB-dependent receptor, beta-barrel domain; 1.
DR Gene3D; 2.170.130.10; TonB-dependent receptor, plug domain; 1.
DR InterPro; IPR008969; CarboxyPept-like_regulatory.
DR InterPro; IPR012910; Plug_dom.
DR InterPro; IPR037066; Plug_dom_sf.
DR InterPro; IPR023996; TonB-dep_OMP_SusC/RagA.
DR InterPro; IPR023997; TonB-dep_OMP_SusC/RagA_CS.
DR InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR NCBIfam; TIGR04056; OMP_RagA_SusC; 1.
DR NCBIfam; TIGR04057; SusC_RagA_signa; 1.
DR PANTHER; PTHR47322; SUSC HOMOLOG-RELATED; 1.
DR PANTHER; PTHR47322:SF22; TONB-DEPENDENT RECEPTOR SUSC; 1.
DR Pfam; PF13715; CarbopepD_reg_2; 1.
DR Pfam; PF07715; Plug; 1.
DR Pfam; PF00593; TonB_dep_Rec; 1.
DR SUPFAM; SSF49464; Carboxypeptidase regulatory domain-like; 1.
DR SUPFAM; SSF56935; Porins; 1.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003357};
KW Receptor {ECO:0000313|EMBL:GAF04193.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000019402};
KW Signal {ECO:0000256|SAM:SignalP};
KW TonB box {ECO:0000256|ARBA:ARBA00023077, ECO:0000256|RuleBase:RU003357};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT SIGNAL 1..19
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 20..1016
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004907226"
FT DOMAIN 112..217
FT /note="TonB-dependent receptor plug"
FT /evidence="ECO:0000259|Pfam:PF07715"
FT DOMAIN 417..754
FT /note="TonB-dependent receptor-like beta-barrel"
FT /evidence="ECO:0000259|Pfam:PF00593"
SQ SEQUENCE 1016 AA; 111927 MW; BF2545D8191D8CBB CRC64;
MKNLLGTIFL LLCTTLIWAQ ETTVTGKVTS AEDGMPIPGV SVVVKGSTNG TITTIDGEFS
LNANMGETLL FSFIGMQAQE HIIDGTTLNV TLQTEVSDLD EVVVVGYGVQ KKSAVTGAIS
SIKSEDIQKM PIQRAEQAIQ GQVAGVQVAA NSGQPGAGIS VNIRGVGTTG DSQPLFIVDG
NPVGDISYLA STDIGSMEVL KDASASAIYG ARGANGVVII TTKKGSEGAA KLTYDGYYGV
QNAWRNMDLL DAREYQMIIN ESLLNSGYDS SSKNWIQDSE VAGIGAGTDW QKEIFRDNAP
IQSHTLTLSG GNQKVVYSSA LSYFEQEGIV SEDKSSYERI NFRANADYTS YDDKLKIGSS
MLYSRFKSQG VDPNSVYNSP LAQAINIDPI TSVRDEDGTF SWPIRNMQEI VNPVANMYYL
HDEYRTDKIV GNLYAEYEFL KDLKVRSSLG IDYAYQWQDT YKPLYELSEI TNNTSTKVDK
NMKNWYTYNW ETTLNYHKVF GAHEVDALAG TTLMTSTYEN LSGSASDLLI EGVDYAYIDN
SGNDESKTAS GGFEENALRS YFGRVNYSYG DKYMASLTVR HDGSSRFGSN NRYATFPSIS
TGWIISEESF LKDKLGPVSF LKIRASWGQN GNENIGNFAY LSLITNNNEY NFNDGLTVKG
SAPEKIANPD LKWETSEQTD IGFDLRVGSK FSLNFDYYNK VTKDLLIDAA IPGYIGNDAP
TVNGGTVENK GVELLLGYRD QINDFSYGAT LNLSANKNEM TKINNEEGIM YGDVSVGPSG
MEQLTIAKVG EPIGFFWGYE TAGVFQNEAE VNAHSKDGVL IQENAQPGDL IYVDQNDDGV
LDNSDRINLG DPYPDFTVGL NLNMAYKNID FSMFWYGVVG NQMINATRRY DLPNVNYQTS
ILNRWTGEGT SNSEPRVVWN DVNNNQGTFS DYMVEDADYL RLKNIQLGFT LPKSVLDKVN
IERIRLYVSG DNLLTFTKYS GFEPEIGNSD NVFYTGVDQG IYPQARVVSI GANITF
//
