ID W7YB39_9BACT Unreviewed; 582 AA.
AC W7YB39;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=Beta-xylosidase {ECO:0000313|EMBL:GAF04883.1};
GN ORFNames=JCM21142_93605 {ECO:0000313|EMBL:GAF04883.1};
OS Saccharicrinis fermentans DSM 9555 = JCM 21142.
OC Bacteria; Bacteroidota; Bacteroidia; Marinilabiliales; Marinilabiliaceae;
OC Saccharicrinis.
OX NCBI_TaxID=869213 {ECO:0000313|EMBL:GAF04883.1, ECO:0000313|Proteomes:UP000019402};
RN [1] {ECO:0000313|EMBL:GAF04883.1, ECO:0000313|Proteomes:UP000019402}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 21142 {ECO:0000313|EMBL:GAF04883.1,
RC ECO:0000313|Proteomes:UP000019402};
RA Starns D., Oshima K., Suda W., Iino T., Yuki M., Inoue J., Kitamura K.,
RA Iida T., Darby A., Hattori M., Ohkuma M.;
RT "Draft Genome Sequence of Cytophaga fermentans JCM 21142T, a Facultative
RT Anaerobe Isolated from Marine Mud.";
RL Genome Announc. 2:e00206-14(2014).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 43 family.
CC {ECO:0000256|ARBA:ARBA00009865, ECO:0000256|RuleBase:RU361187}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAF04883.1}.
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DR EMBL; BAMD01000059; GAF04883.1; -; Genomic_DNA.
DR RefSeq; WP_027471202.1; NZ_KI912107.1.
DR AlphaFoldDB; W7YB39; -.
DR STRING; 869213.GCA_000517085_01352; -.
DR eggNOG; COG3507; Bacteria.
DR OrthoDB; 9801455at2; -.
DR Proteomes; UP000019402; Unassembled WGS sequence.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR CDD; cd18617; GH43_XynB-like; 1.
DR Gene3D; 2.60.120.200; -; 1.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR041542; GH43_C2.
DR InterPro; IPR006710; Glyco_hydro_43.
DR InterPro; IPR023296; Glyco_hydro_beta-prop_sf.
DR PANTHER; PTHR42812; BETA-XYLOSIDASE; 1.
DR PANTHER; PTHR42812:SF12; BETA-XYLOSIDASE-RELATED; 1.
DR Pfam; PF17851; GH43_C2; 1.
DR Pfam; PF04616; Glyco_hydro_43; 1.
DR SUPFAM; SSF75005; Arabinanase/levansucrase/invertase; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295, ECO:0000256|RuleBase:RU361187};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU361187};
KW Reference proteome {ECO:0000313|Proteomes:UP000019402}.
FT DOMAIN 400..580
FT /note="Beta-xylosidase C-terminal Concanavalin A-like"
FT /evidence="ECO:0000259|Pfam:PF17851"
FT ACT_SITE 85
FT /note="Proton acceptor"
FT /evidence="ECO:0000256|PIRSR:PIRSR606710-1"
FT ACT_SITE 258
FT /note="Proton donor"
FT /evidence="ECO:0000256|PIRSR:PIRSR606710-1"
FT SITE 193
FT /note="Important for catalytic activity, responsible for
FT pKa modulation of the active site Glu and correct
FT orientation of both the proton donor and substrate"
FT /evidence="ECO:0000256|PIRSR:PIRSR606710-2"
SQ SEQUENCE 582 AA; 66229 MW; 3E94F6273CCC7CF4 CRC64;
MMNQVIENIS SHHLLLKKVS IAISILLLIM SCTLVSEEKP KFVADHLVAH FDYFSYSGND
DFYIHHALPD SDYYYNPILP GWYSDPSVGS DGKNFFMVNS TFSYFPGVPI FHSTDLMNWK
QIGHVLDRHE QLPLEGQRTS EGIFAPAISY NPHNKTWYMI TTNIKKGNFF VKTKDPFGAW
SNPIWLPDVH GIDPSFFFDD DGKAYIVNND VPDGGSLYQG HRAIRITQFD ADKDVTLGTS
LMLVNGGVNI AEKPIWIEGP HMYKIHGKYF LMCAEGGTSV DHREVIFKSD SPWGNFMPKK
EPILTQRHLD KDREYPITCA GHADLIQKVN GEWWAVFLAC RPLFNRFENL GRESFLMPVR
WGKDGFPFIT KENELIPRIV QMENIPRDSV VTFGNVNKVD EFDDLHLGME WMSLRGDISH
LYSLVENPGF LTLKCANVSS KELQKPAFIA RRLQHHKFEC ATQMYFTPKS ESECAGLLLY
KDETHQYLCA VTLKNNTPVI QLIKVKEDGV DILAERKLLN MNDAIDLKIV SDGLGFSFLY
KLSSSSQWIT MASEIDAYYL STAQSYGFTG TTVGLYASKK GY
//
