ID W7YRL0_9BACT Unreviewed; 995 AA.
AC W7YRL0;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE SubName: Full=Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:GAF05064.1};
GN ORFNames=JCM21142_93787 {ECO:0000313|EMBL:GAF05064.1};
OS Saccharicrinis fermentans DSM 9555 = JCM 21142.
OC Bacteria; Bacteroidota; Bacteroidia; Marinilabiliales; Marinilabiliaceae;
OC Saccharicrinis.
OX NCBI_TaxID=869213 {ECO:0000313|EMBL:GAF05064.1, ECO:0000313|Proteomes:UP000019402};
RN [1] {ECO:0000313|EMBL:GAF05064.1, ECO:0000313|Proteomes:UP000019402}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 21142 {ECO:0000313|EMBL:GAF05064.1,
RC ECO:0000313|Proteomes:UP000019402};
RA Starns D., Oshima K., Suda W., Iino T., Yuki M., Inoue J., Kitamura K.,
RA Iida T., Darby A., Hattori M., Ohkuma M.;
RT "Draft Genome Sequence of Cytophaga fermentans JCM 21142T, a Facultative
RT Anaerobe Isolated from Marine Mud.";
RL Genome Announc. 2:e00206-14(2014).
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004571}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004571}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC {ECO:0000256|RuleBase:RU003357}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAF05064.1}.
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DR EMBL; BAMD01000066; GAF05064.1; -; Genomic_DNA.
DR AlphaFoldDB; W7YRL0; -.
DR STRING; 869213.GCA_000517085_04091; -.
DR eggNOG; COG4206; Bacteria.
DR Proteomes; UP000019402; Unassembled WGS sequence.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR Gene3D; 2.40.170.20; TonB-dependent receptor, beta-barrel domain; 1.
DR Gene3D; 2.170.130.10; TonB-dependent receptor, plug domain; 1.
DR InterPro; IPR008969; CarboxyPept-like_regulatory.
DR InterPro; IPR012910; Plug_dom.
DR InterPro; IPR037066; Plug_dom_sf.
DR InterPro; IPR023996; TonB-dep_OMP_SusC/RagA.
DR InterPro; IPR023997; TonB-dep_OMP_SusC/RagA_CS.
DR InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR NCBIfam; TIGR04056; OMP_RagA_SusC; 1.
DR NCBIfam; TIGR04057; SusC_RagA_signa; 1.
DR PANTHER; PTHR47322; SUSC HOMOLOG-RELATED; 1.
DR PANTHER; PTHR47322:SF22; TONB-DEPENDENT RECEPTOR SUSC; 1.
DR Pfam; PF13715; CarbopepD_reg_2; 1.
DR Pfam; PF07715; Plug; 1.
DR Pfam; PF00593; TonB_dep_Rec; 1.
DR SUPFAM; SSF49464; Carboxypeptidase regulatory domain-like; 1.
DR SUPFAM; SSF56935; Porins; 1.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003357};
KW Receptor {ECO:0000313|EMBL:GAF05064.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000019402};
KW Signal {ECO:0000256|SAM:SignalP};
KW TonB box {ECO:0000256|ARBA:ARBA00023077, ECO:0000256|RuleBase:RU003357};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..995
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004904559"
FT DOMAIN 119..241
FT /note="TonB-dependent receptor plug"
FT /evidence="ECO:0000259|Pfam:PF07715"
FT DOMAIN 444..808
FT /note="TonB-dependent receptor-like beta-barrel"
FT /evidence="ECO:0000259|Pfam:PF00593"
SQ SEQUENCE 995 AA; 109288 MW; 4CFE9E839A486371 CRC64;
MRKLALFLSL ILFVGSQTLT AQTKAIAGKV VDNFGEAIPG VSIVVKGTTI GTISRPDGTY
QLNVPEDAAS IVFTFVGMAT QEVALTGQST INVTMESDSE DIDEVVVTAM GIKRSEKTLG
YAATTVNNEE LIKARNTNVS SSLSGKVAGV QVQTNSSDPG AASSVVIRGF SSINGSNQPL
YVVDGIPLQS STLNLNELDK SGQAVSTSGL SNVSADDIES MTVLKGAAAT ALYGSRASNG
VIIITTKTGK KGKEKNFTVT YNGGLQFREV SLLPDFQNDF GQGWNGKQTY IENGSWGPAL
DGSTQVYGPI YNNEQLIHTY SAKNDNVKDF FEIGVSQSHS LSISGISEDE KMDYYLSYAY
SNDDGIMPSD ADSYKRNTIA YRTNYKATEW LKISSSVNFA RSETDLVSSY QGTSVIDGLY
EMPRDISIVD MEDTSSPFNQ PQAYFTPYGV TNPYWSLENN YNHLDSKQIY GKLQLDINPI
KDLTLTYRFG FDYSDYDLKI GTPQIAVDDE LINEDYGYSP VNMNQDGNVY ARYRRSYELN
HDFLANYDTK FNNISFAAIG GVNINETSAT ALIGQTDVLT FDTGFWDLSN GSTKSTLGEA
QQKKRVIGLF GDATFGYNEM LFLNLSARND WSSTLPIDDN SYFYYGTTLS WLFTELLPRN
NVLSFGKIRL AYGKTGNDAD VYQTGTRYVQ GYAHGYYGSN IASFPMNSSN SFIASTIAGS
ATLSPEMTTE SEIGMNLQFL NGRLGLDASY YNRKTDKQIF ELPVDPSTGY SYNVLNFGEV
ENKGFELLLS TTPIRTNNFR WDVDVNFSVN KNKVLSLPES VEGGKVQIYR FAAGDDAVYM
YAEEGKPMGQ YYTYLPQYVT DDESEFFGSP IVDSHGQPVL GEDVEDTGRD MNHDWTGGVN
TTLSAYGFSL SAALDVRYGG TMFSRTKNLM QFTGNGIATT YNNRNPFIIP NSVQATDNGD
GTMSYSENTE VLKLSDSSIQ DYYNKFGYGN GARPI
//
