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Database: UniProt
Entry: W8T9B2_PEPAC
LinkDB: W8T9B2_PEPAC
Original site: W8T9B2_PEPAC 
ID   W8T9B2_PEPAC            Unreviewed;       556 AA.
AC   W8T9B2;
DT   14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT   14-MAY-2014, sequence version 1.
DT   27-MAR-2024, entry version 36.
DE   SubName: Full=Signaling protein YkoW {ECO:0000313|EMBL:AHM57510.1};
GN   Name=ykoW {ECO:0000313|EMBL:AHM57510.1};
GN   ORFNames=EAL2_808p00030 {ECO:0000313|EMBL:AHM57510.1};
OS   Peptoclostridium acidaminophilum DSM 3953.
OG   Plasmid EAL2_808p {ECO:0000313|EMBL:AHM57510.1,
OG   ECO:0000313|Proteomes:UP000019591}.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Peptostreptococcaceae;
OC   Peptoclostridium.
OX   NCBI_TaxID=1286171 {ECO:0000313|EMBL:AHM57510.1, ECO:0000313|Proteomes:UP000019591};
RN   [1] {ECO:0000313|EMBL:AHM57510.1, ECO:0000313|Proteomes:UP000019591}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 3953 {ECO:0000313|EMBL:AHM57510.1,
RC   ECO:0000313|Proteomes:UP000019591};
RC   PLASMID=Plasmid EAL2_808p {ECO:0000313|Proteomes:UP000019591};
RX   PubMed=24926057;
RA   Poehlein A., Andreesen J.R., Daniel R.;
RT   "Complete Genome Sequence of Amino Acid-Utilizing Eubacterium
RT   acidaminophilum al-2 (DSM 3953).";
RL   Genome Announc. 2:e00573-14(2014).
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DR   EMBL; CP007453; AHM57510.1; -; Genomic_DNA.
DR   RefSeq; WP_025436433.1; NZ_CP007453.1.
DR   AlphaFoldDB; W8T9B2; -.
DR   KEGG; eac:EAL2_808p00030; -.
DR   PATRIC; fig|1286171.3.peg.2179; -.
DR   eggNOG; COG5001; Bacteria.
DR   HOGENOM; CLU_489790_0_0_9; -.
DR   OrthoDB; 9762141at2; -.
DR   Proteomes; UP000019591; Plasmid EAL2_808p.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR   CDD; cd01949; GGDEF; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   NCBIfam; TIGR00254; GGDEF; 1.
DR   PANTHER; PTHR46663; DIGUANYLATE CYCLASE DGCT-RELATED; 1.
DR   PANTHER; PTHR46663:SF2; GGDEF DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF00990; GGDEF; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR   PROSITE; PS50887; GGDEF; 1.
PE   4: Predicted;
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Membrane {ECO:0000256|SAM:Phobius}; Plasmid {ECO:0000313|EMBL:AHM57510.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000019591};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        7..30
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        42..60
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        67..89
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        104..123
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        135..157
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        169..189
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        201..221
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        233..252
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          415..548
FT                   /note="GGDEF"
FT                   /evidence="ECO:0000259|PROSITE:PS50887"
SQ   SEQUENCE   556 AA;  63727 MW;  AA400201A2409E75 CRC64;
     MNKASEFNLY SALPLMIAMY VTSYLAWLLF SSGEAGMVVG DFFSLAGDAG ALALLVYACR
     HVKHNKAYWL MMMLSVLFFF LGDAVWVYHE VLMRQEIPEW STSYIFYSLN SLFLMLSTII
     LAFKEKGKWD SLQLLMDSIT VLCIFTYISW LLFFKGILPS LKIMSASEWR TVISVMLDFI
     ALSGFLILTV SRSDSIFPRR VYFLLLSGIA IFCVADAVYY HQVLRDSYMS SNIVDLFWYI
     SVLLIGASGY YMQHMEKGGV HHVHIADAEM AAVKDHTWIM LIPLGVIFIT NYRDFKTIAF
     FSGLVLLHHL MTRHIKISAQ NAKLLVHQKE LNNSLKVRME ETNQLNEQLC EKIREIHHLN
     ENLELMIAER TYELKAKNAK LDILANCDPL TCLPNRRNFL RSLDSYLSRA EVSKERFALL
     FIDIDRFKEI NDTYGHSVGD KVLVQASKRM SMSLRSGDFI ARHGGDEFIA IIDRLYEKDD
     ILPVIKRIRE SFELPLKIEG HRIQIGLSVG AAVYPYDGTD KISLLKCADS NMYLDKFTEV
     DDVSIGLQQR TTDFSS
//
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