ID W9VYI8_9EURO Unreviewed; 546 AA.
AC W9VYI8;
DT 14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT 14-MAY-2014, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE RecName: Full=Matrin-type domain-containing protein {ECO:0000259|PROSITE:PS50171};
GN ORFNames=A1O5_12348 {ECO:0000313|EMBL:EXJ57790.1};
OS Cladophialophora psammophila CBS 110553.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae;
OC Cladophialophora.
OX NCBI_TaxID=1182543 {ECO:0000313|EMBL:EXJ57790.1, ECO:0000313|Proteomes:UP000019471};
RN [1] {ECO:0000313|EMBL:EXJ57790.1, ECO:0000313|Proteomes:UP000019471}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CBS 110553 {ECO:0000313|EMBL:EXJ57790.1,
RC ECO:0000313|Proteomes:UP000019471};
RG The Broad Institute Genomics Platform;
RA Cuomo C., de Hoog S., Gorbushina A., Walker B., Young S.K., Zeng Q.,
RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Cladophialophora psammophila CBS 110553.";
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SF3A3 family.
CC {ECO:0000256|ARBA:ARBA00008776}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EXJ57790.1}.
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DR EMBL; AMGX01000033; EXJ57790.1; -; Genomic_DNA.
DR RefSeq; XP_007751107.1; XM_007752917.1.
DR AlphaFoldDB; W9VYI8; -.
DR STRING; 1182543.W9VYI8; -.
DR GeneID; 19197034; -.
DR eggNOG; KOG2636; Eukaryota.
DR HOGENOM; CLU_027160_1_0_1; -.
DR OrthoDB; 5483967at2759; -.
DR Proteomes; UP000019471; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR000690; Matrin/U1-C_Znf_C2H2.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR031774; SF3A3_dom.
DR InterPro; IPR024598; SF3a60/Prp9_C.
DR InterPro; IPR021966; SF3a60_bindingd.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR12786:SF2; SPLICING FACTOR 3A SUBUNIT 3; 1.
DR PANTHER; PTHR12786; SPLICING FACTOR SF3A-RELATED; 1.
DR Pfam; PF16837; SF3A3; 1.
DR Pfam; PF12108; SF3a60_bindingd; 1.
DR Pfam; PF11931; SF3a60_Prp9_C; 1.
DR Pfam; PF12874; zf-met; 1.
DR SMART; SM00355; ZnF_C2H2; 2.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS50171; ZF_MATRIN; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022771};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000019471};
KW Zinc {ECO:0000256|ARBA:ARBA00022771};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 439..470
FT /note="Matrin-type"
FT /evidence="ECO:0000259|PROSITE:PS50171"
FT REGION 230..262
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 385..408
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 236..254
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 546 AA; 62155 MW; 8C97A897C9E1AFB2 CRC64;
MILEDQRFLH EDLERLEQAI TDRVAEDPKN ASQIKDRLTR DHQIDGFLSR IQEQSKRLLD
IYKDAEGLRL KEVQSLSTGE PFEEFYKQLE EIKDFHRRYP NEPVENLERA YKRRRPEEGE
YIPSEVDNMF SGEESNGRFL DLTQLHEDYL NIPGIKRLTY LQYLDNFDAF ELPRLPIKRQ
NKITDQYLQY VANLDSYLES FVRRTRPLED QTKMFLRFQR EFDAAWEAGT VPGWTKEQKE
QESTNASAAS RPQTEGTGAG VWCPDCEKEF TNQNVYKSHL TGKKHIKNAE AKKSRIAANG
HGATNGATGG SSKPLAVAPS LSGTALKERA IASHEHRIRA LADLLSNERS NTRVNVERKQ
GMTERERQAE LDALFAEDDA AVAASDRRAA GKNRTGGEDS GSDSEGDEKI YNPLKLPLAW
DGKPIPYWLY KLHGLGVEFN CEICGNFVYM GRRAFDKHFS EARHIYGLKC LGITGSALSG
AAVGAGGLSL FREITGIEDA LKLWDKIKKE KREKEVKEDQ VVQMEDGEGN VMPERIYLDL
QKQGIL
//
