GenomeNet

Database: UniProt
Entry: W9YE17_9EURO
LinkDB: W9YE17_9EURO
Original site: W9YE17_9EURO 
ID   W9YE17_9EURO            Unreviewed;       458 AA.
AC   W9YE17;
DT   14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT   14-MAY-2014, sequence version 1.
DT   27-MAR-2024, entry version 33.
DE   RecName: Full=DNA-directed RNA polymerase III subunit RPC6 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=A1O3_04466 {ECO:0000313|EMBL:EXJ87506.1};
OS   Capronia epimyces CBS 606.96.
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Capronia.
OX   NCBI_TaxID=1182542 {ECO:0000313|EMBL:EXJ87506.1, ECO:0000313|Proteomes:UP000019478};
RN   [1] {ECO:0000313|EMBL:EXJ87506.1, ECO:0000313|Proteomes:UP000019478}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CBS 606.96 {ECO:0000313|EMBL:EXJ87506.1,
RC   ECO:0000313|Proteomes:UP000019478};
RG   The Broad Institute Genomics Platform;
RA   Cuomo C., de Hoog S., Gorbushina A., Walker B., Young S.K., Zeng Q.,
RA   Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA   Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA   Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA   Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA   Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA   Birren B.;
RT   "The Genome Sequence of Capronia epimyces CBS 606.96.";
RL   Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the eukaryotic RPC34/RPC39 RNA polymerase
CC       subunit family. {ECO:0000256|ARBA:ARBA00011038}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EXJ87506.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AMGY01000003; EXJ87506.1; -; Genomic_DNA.
DR   RefSeq; XP_007732785.1; XM_007734595.1.
DR   AlphaFoldDB; W9YE17; -.
DR   STRING; 1182542.W9YE17; -.
DR   GeneID; 19168585; -.
DR   eggNOG; KOG3233; Eukaryota.
DR   HOGENOM; CLU_033661_0_2_1; -.
DR   OrthoDB; 930780at2759; -.
DR   Proteomes; UP000019478; Unassembled WGS sequence.
DR   GO; GO:0005666; C:RNA polymerase III complex; IEA:InterPro.
DR   GO; GO:0006383; P:transcription by RNA polymerase III; IEA:InterPro.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR007832; RNA_pol_Rpc34.
DR   InterPro; IPR016049; RNA_pol_Rpc34-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR12780:SF1; DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC6; 1.
DR   PANTHER; PTHR12780; RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED; 1.
DR   Pfam; PF05158; RNA_pol_Rpc34; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000019478};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT   REGION          204..260
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          414..458
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        227..248
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        419..436
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   458 AA;  51000 MW;  B999781A6A1A5280 CRC64;
     MPPKVAASPT PGFLPRGGRN RIAEALYEWC RKNHDVGHVF GQEELLSAGI IPNRDLSILL
     SSVTHLVDNS LFRLHDRAGG TIGWELVDQE KAKNYAGLTR DEGIVLLIID AAGTSGIWTK
     TIKFRSSLHG RVLDRVYKSL EAKGLIKPMK HVKNPGRKMY ILAGLEPSEE ASGGAWFSEG
     RLDIGLVDTI SKVVEHYVST QSWQVIEPED EEDEPLSPGQ KRKAPSAGFE SRGDERAKAV
     KNNEGQHKAK GPKQAPQKSY RPFDAGWISY PTLRDITSHI LSINVTPTIL PQNAIHQLLE
     VMVYDDRLFK MHRSPNDDEI PDDPIANTVT MYRSFKTPND LLEQHHLEKR KANSHESVRR
     AAYRQQELED IGQGGASEVP CMHCPVFDIC GDGGPVNVVT CKYFDQWYVQ LRRADDEASA
     GQPSSKEKEK NKYKDGQENG PTVNGNPGPK VDVDLELS
//
DBGET integrated database retrieval system