ID X1WB90_DANRE Unreviewed; 430 AA.
AC X1WB90; A0A8M1PV01;
DT 14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT 14-MAY-2014, sequence version 1.
DT 24-JAN-2024, entry version 56.
DE SubName: Full=Dehydrogenase/reductase (SDR family) member 13b.1 {ECO:0000313|Ensembl:ENSDARP00000127481};
DE SubName: Full=Tapasin-related protein-like isoform X1 {ECO:0000313|RefSeq:XP_001341662.6};
GN Name=si:ch211-108p6.4 {ECO:0000313|RefSeq:XP_001341662.6,
GN ECO:0000313|ZFIN:ZDB-GENE-131121-649};
GN OrderedLocusNames=dhrs13b.1 {ECO:0000313|Ensembl:ENSDARP00000127481,
GN ECO:0000313|ZFIN:ZDB-GENE-040801-253};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000127481};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000127481, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000127481};
RX PubMed=23594743; DOI=10.1038/nature12111;
RG Genome Reference Consortium Zebrafish;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Eliott D.,
RA Threadgold G., Harden G., Ware D., Begum S., Mortimore B., Mortimer B.,
RA Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M.,
RA Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M.,
RA Glithero R., Howden P., Barker N., Lloyd C., Stevens C., Harley J.,
RA Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D.,
RA Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K.,
RA Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R.,
RA Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M.,
RA Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M.,
RA Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M.,
RA Woodmansey R., Clark G., Cooper J., Cooper J., Tromans A., Grafham D.,
RA Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J.,
RA Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I.,
RA Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M.,
RA Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M.,
RA Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G., Osoegawa K., Zhu B.,
RA Rapp A., Widaa S., Langford C., Yang F., Schuster S.C., Carter N.P.,
RA Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R.,
RA Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I.,
RA Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H.,
RA Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000313|Ensembl:ENSDARP00000127481}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000127481};
RG Ensembl;
RL Submitted (MAR-2014) to UniProtKB.
RN [3] {ECO:0000313|RefSeq:XP_001341662.6}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|RefSeq:XP_001341662.6};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
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DR EMBL; CR457447; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_001341662.6; XM_001341626.8.
DR PaxDb; 7955-ENSDARP00000107484; -.
DR Ensembl; ENSDART00000155636; ENSDARP00000127481; ENSDARG00000097019.
DR Ensembl; ENSDART00000155636.2; ENSDARP00000127481.1; ENSDARG00000097019.3.
DR GeneID; 100001718; -.
DR KEGG; dre:100001718; -.
DR ZFIN; ZDB-GENE-040801-253; dhrs13b.1.
DR ZFIN; ZDB-GENE-131121-649; si:ch211-108p6.4.
DR eggNOG; KOG1208; Eukaryota.
DR HOGENOM; CLU_631576_0_0_1; -.
DR OMA; IQWLPCY; -.
DR OrthoDB; 4220387at2759; -.
DR Proteomes; UP000000437; Chromosome 15.
DR Bgee; ENSDARG00000097019; Expressed in intestine and 16 other cell types or tissues.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; Immunoglobulins; 2.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003006; Ig/MHC_CS.
DR InterPro; IPR003597; Ig_C1-set.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR013106; Ig_V-set.
DR PANTHER; PTHR23411:SF2; DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 13B.1-RELATED; 1.
DR PANTHER; PTHR23411; TAPASIN; 1.
DR Pfam; PF07654; C1-set; 1.
DR Pfam; PF07686; V-set; 1.
DR SMART; SM00409; IG; 2.
DR SMART; SM00407; IGc1; 1.
DR SUPFAM; SSF48726; Immunoglobulin; 2.
DR PROSITE; PS50835; IG_LIKE; 2.
DR PROSITE; PS00290; IG_MHC; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Immunoglobulin domain {ECO:0000256|ARBA:ARBA00023319};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..18
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 19..430
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5040717398"
FT TRANSMEM 391..415
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 167..276
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 279..381
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
SQ SEQUENCE 430 AA; 48523 MW; 932324AA4C00DBA2 CRC64;
MFWTFAGLVL ALCLGVSGSQ TLPDVHWPHC RFMDEKVHVN KEGHIETEYI QRKAVVQFGK
DGDSALHPAI TFLVTGSEVD MRHYLEGREN MIQCEIRRYS TGGIVMRWPV AGAQEYDVWF
TCTLRHTQGL FVITTFLRHT PATPAQGKLD FLQWMKISDG DLLTTSAAMV ILTRTPSVEV
GFSKEPELHC QFAVDHKLPK ATVEWKLQRH GKHIKLFSYS SLTGKTEGSG VTVKAIEGGN
ASLKLQPVRK RSEGTYVCSV KIPPLNGSHN IPFSISEQPR VSLNVPNTLA MAAGQDKKVI
CDAESYYPLD VNIEWYLERH RENPMPSFLN VRHSSHRLNQ DGTYSISAFL YLEPGLENSG
YQYTCSVSHK SLLNPINKSF FLVVTETDST MWYFAVFGFI ISMLLIMHYI PRIFAGRKSA
KRYMSSCLGV
//