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Database: UniProt
Entry: X1WB90_DANRE
LinkDB: X1WB90_DANRE
Original site: X1WB90_DANRE 
ID   X1WB90_DANRE            Unreviewed;       430 AA.
AC   X1WB90; A0A8M1PV01;
DT   14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT   14-MAY-2014, sequence version 1.
DT   24-JAN-2024, entry version 56.
DE   SubName: Full=Dehydrogenase/reductase (SDR family) member 13b.1 {ECO:0000313|Ensembl:ENSDARP00000127481};
DE   SubName: Full=Tapasin-related protein-like isoform X1 {ECO:0000313|RefSeq:XP_001341662.6};
GN   Name=si:ch211-108p6.4 {ECO:0000313|RefSeq:XP_001341662.6,
GN   ECO:0000313|ZFIN:ZDB-GENE-131121-649};
GN   OrderedLocusNames=dhrs13b.1 {ECO:0000313|Ensembl:ENSDARP00000127481,
GN   ECO:0000313|ZFIN:ZDB-GENE-040801-253};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Danionidae; Danioninae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000127481};
RN   [1] {ECO:0000313|Ensembl:ENSDARP00000127481, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000127481};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RG   Genome Reference Consortium Zebrafish;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA   Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA   Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA   White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA   Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA   Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA   Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Eliott D.,
RA   Threadgold G., Harden G., Ware D., Begum S., Mortimore B., Mortimer B.,
RA   Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M.,
RA   Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M.,
RA   Glithero R., Howden P., Barker N., Lloyd C., Stevens C., Harley J.,
RA   Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D.,
RA   Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K.,
RA   Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R.,
RA   Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M.,
RA   Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M.,
RA   Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M.,
RA   Woodmansey R., Clark G., Cooper J., Cooper J., Tromans A., Grafham D.,
RA   Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J.,
RA   Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I.,
RA   Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M.,
RA   Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M.,
RA   Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G., Osoegawa K., Zhu B.,
RA   Rapp A., Widaa S., Langford C., Yang F., Schuster S.C., Carter N.P.,
RA   Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R.,
RA   Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I.,
RA   Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H.,
RA   Rogers J., Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the human
RT   genome.";
RL   Nature 496:498-503(2013).
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000127481}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000127481};
RG   Ensembl;
RL   Submitted (MAR-2014) to UniProtKB.
RN   [3] {ECO:0000313|RefSeq:XP_001341662.6}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|RefSeq:XP_001341662.6};
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
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DR   EMBL; CR457447; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_001341662.6; XM_001341626.8.
DR   PaxDb; 7955-ENSDARP00000107484; -.
DR   Ensembl; ENSDART00000155636; ENSDARP00000127481; ENSDARG00000097019.
DR   Ensembl; ENSDART00000155636.2; ENSDARP00000127481.1; ENSDARG00000097019.3.
DR   GeneID; 100001718; -.
DR   KEGG; dre:100001718; -.
DR   ZFIN; ZDB-GENE-040801-253; dhrs13b.1.
DR   ZFIN; ZDB-GENE-131121-649; si:ch211-108p6.4.
DR   eggNOG; KOG1208; Eukaryota.
DR   HOGENOM; CLU_631576_0_0_1; -.
DR   OMA; IQWLPCY; -.
DR   OrthoDB; 4220387at2759; -.
DR   Proteomes; UP000000437; Chromosome 15.
DR   Bgee; ENSDARG00000097019; Expressed in intestine and 16 other cell types or tissues.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 2.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR036179; Ig-like_dom_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR003006; Ig/MHC_CS.
DR   InterPro; IPR003597; Ig_C1-set.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR013106; Ig_V-set.
DR   PANTHER; PTHR23411:SF2; DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 13B.1-RELATED; 1.
DR   PANTHER; PTHR23411; TAPASIN; 1.
DR   Pfam; PF07654; C1-set; 1.
DR   Pfam; PF07686; V-set; 1.
DR   SMART; SM00409; IG; 2.
DR   SMART; SM00407; IGc1; 1.
DR   SUPFAM; SSF48726; Immunoglobulin; 2.
DR   PROSITE; PS50835; IG_LIKE; 2.
DR   PROSITE; PS00290; IG_MHC; 1.
PE   4: Predicted;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Immunoglobulin domain {ECO:0000256|ARBA:ARBA00023319};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW   Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..18
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           19..430
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5040717398"
FT   TRANSMEM        391..415
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          167..276
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   DOMAIN          279..381
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
SQ   SEQUENCE   430 AA;  48523 MW;  932324AA4C00DBA2 CRC64;
     MFWTFAGLVL ALCLGVSGSQ TLPDVHWPHC RFMDEKVHVN KEGHIETEYI QRKAVVQFGK
     DGDSALHPAI TFLVTGSEVD MRHYLEGREN MIQCEIRRYS TGGIVMRWPV AGAQEYDVWF
     TCTLRHTQGL FVITTFLRHT PATPAQGKLD FLQWMKISDG DLLTTSAAMV ILTRTPSVEV
     GFSKEPELHC QFAVDHKLPK ATVEWKLQRH GKHIKLFSYS SLTGKTEGSG VTVKAIEGGN
     ASLKLQPVRK RSEGTYVCSV KIPPLNGSHN IPFSISEQPR VSLNVPNTLA MAAGQDKKVI
     CDAESYYPLD VNIEWYLERH RENPMPSFLN VRHSSHRLNQ DGTYSISAFL YLEPGLENSG
     YQYTCSVSHK SLLNPINKSF FLVVTETDST MWYFAVFGFI ISMLLIMHYI PRIFAGRKSA
     KRYMSSCLGV
//
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