ID X6LIH1_RETFI Unreviewed; 725 AA.
AC X6LIH1;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 08-NOV-2023, entry version 23.
DE SubName: Full=NB-ARC domain-containing protein {ECO:0000313|EMBL:ETO00505.1};
GN ORFNames=RFI_36931 {ECO:0000313|EMBL:ETO00505.1};
OS Reticulomyxa filosa.
OC Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC Reticulomyxidae; Reticulomyxa.
OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO00505.1, ECO:0000313|Proteomes:UP000023152};
RN [1] {ECO:0000313|EMBL:ETO00505.1, ECO:0000313|Proteomes:UP000023152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24332546;
RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL Curr. Biol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETO00505.1}.
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DR EMBL; ASPP01040838; ETO00505.1; -; Genomic_DNA.
DR AlphaFoldDB; X6LIH1; -.
DR EnsemblProtists; ETO00505; ETO00505; RFI_36931.
DR OrthoDB; 22040at2759; -.
DR Proteomes; UP000023152; Unassembled WGS sequence.
DR CDD; cd00200; WD40; 2.
DR Gene3D; 2.160.20.80; E3 ubiquitin-protein ligase SopA; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 8.
DR InterPro; IPR001646; 5peptide_repeat.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR011044; Quino_amine_DH_bsu.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19879; TRANSCRIPTION INITIATION FACTOR TFIID; 1.
DR PANTHER; PTHR19879:SF9; WD_REPEATS_REGION DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00805; Pentapeptide; 1.
DR Pfam; PF00400; WD40; 14.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 14.
DR SUPFAM; SSF141571; Pentapeptide repeat-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR SUPFAM; SSF50969; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 4.
DR PROSITE; PS50082; WD_REPEATS_2; 14.
DR PROSITE; PS50294; WD_REPEATS_REGION; 14.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 62..103
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 104..145
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 146..187
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 188..229
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 230..271
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 272..313
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 314..346
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 372..413
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 430..471
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 472..513
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 514..555
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 554..595
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 596..637
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 638..679
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 725 AA; 81214 MW; FD0BCEEE32D47A45 CRC64;
MHNQDWSNIK IPYAILDHAF LEGTNFSNAN LDHVRFYQSC LTKVNFTNAS MNNIYFGEYP
YLEGHSSNVL GIKFLPDGTK IVSYSNDNTI RVWDTSSRKQ LHILEGHSSI INAVQLSNDG
SKIVSCSSDK TARIWDALLG QQLQLLEGHL KSVNSAEFSS NASKVVSCSD DTTIRIWDVS
SGKQTQLLAG HSAWVKKVKF SPDDSKVVSC SVDRSIRIWD ASSGTQLLLL EGHYSYITAV
QFISNGSKII SSSYDKTIRT WDALSGQRLQ LLEGHVHYIY GIQLSSDGSK VLSYSDDKTI
RIWDLISGKQ LQVLEGSSSD IKAVSFSSDG SRVVSGTYDG AIRLWDESKI LSSGGRTIRI
WDISLERKIQ LTEGHVNIMM TVEFSPDGSK IVSGSEDKTV RLWDVQSGRQ IQIFEVRIWD
VLSGKQLQLL EGHSSWIYKV RFSPDGSKFV SCSHDKTIRI WDIFSGKQIG LLNGHSADVI
EAQFMPDGNK IMSCSWDHTI RLWDAFSGKQ IQIFEGHTKF VDGIQISSDG SKFVSYSWDM
TIRVWDVSSG KQLFSFEYKD VTEIQFSSDD TTIVACSKDC TIRLWNVLTG KQIQLLEGHS
SGVRGIKFSS DGSKIISYSD DKTIRIWNVY SGKQIQVLEG HNGYINCIHL SPNGSKLVSC
SMDKTIRLWG SDNSKIVDVT ETSVVHYIWR VGVQIGLSME DSIWKNTKGL EDQQKLLVKQ
RGGIF
//