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Database: UniProt
Entry: X6LIH1_RETFI
LinkDB: X6LIH1_RETFI
Original site: X6LIH1_RETFI 
ID   X6LIH1_RETFI            Unreviewed;       725 AA.
AC   X6LIH1;
DT   11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT   11-JUN-2014, sequence version 1.
DT   08-NOV-2023, entry version 23.
DE   SubName: Full=NB-ARC domain-containing protein {ECO:0000313|EMBL:ETO00505.1};
GN   ORFNames=RFI_36931 {ECO:0000313|EMBL:ETO00505.1};
OS   Reticulomyxa filosa.
OC   Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC   Reticulomyxidae; Reticulomyxa.
OX   NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO00505.1, ECO:0000313|Proteomes:UP000023152};
RN   [1] {ECO:0000313|EMBL:ETO00505.1, ECO:0000313|Proteomes:UP000023152}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=24332546;
RA   Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA   Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA   Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT   "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL   Curr. Biol. 0:0-0(2013).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ETO00505.1}.
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DR   EMBL; ASPP01040838; ETO00505.1; -; Genomic_DNA.
DR   AlphaFoldDB; X6LIH1; -.
DR   EnsemblProtists; ETO00505; ETO00505; RFI_36931.
DR   OrthoDB; 22040at2759; -.
DR   Proteomes; UP000023152; Unassembled WGS sequence.
DR   CDD; cd00200; WD40; 2.
DR   Gene3D; 2.160.20.80; E3 ubiquitin-protein ligase SopA; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 8.
DR   InterPro; IPR001646; 5peptide_repeat.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR011044; Quino_amine_DH_bsu.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR19879; TRANSCRIPTION INITIATION FACTOR TFIID; 1.
DR   PANTHER; PTHR19879:SF9; WD_REPEATS_REGION DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF00805; Pentapeptide; 1.
DR   Pfam; PF00400; WD40; 14.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00320; WD40; 14.
DR   SUPFAM; SSF141571; Pentapeptide repeat-like; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 2.
DR   SUPFAM; SSF50969; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 4.
DR   PROSITE; PS50082; WD_REPEATS_2; 14.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 14.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   REPEAT          62..103
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          104..145
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          146..187
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          188..229
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          230..271
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          272..313
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          314..346
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          372..413
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          430..471
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          472..513
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          514..555
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          554..595
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          596..637
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          638..679
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ   SEQUENCE   725 AA;  81214 MW;  FD0BCEEE32D47A45 CRC64;
     MHNQDWSNIK IPYAILDHAF LEGTNFSNAN LDHVRFYQSC LTKVNFTNAS MNNIYFGEYP
     YLEGHSSNVL GIKFLPDGTK IVSYSNDNTI RVWDTSSRKQ LHILEGHSSI INAVQLSNDG
     SKIVSCSSDK TARIWDALLG QQLQLLEGHL KSVNSAEFSS NASKVVSCSD DTTIRIWDVS
     SGKQTQLLAG HSAWVKKVKF SPDDSKVVSC SVDRSIRIWD ASSGTQLLLL EGHYSYITAV
     QFISNGSKII SSSYDKTIRT WDALSGQRLQ LLEGHVHYIY GIQLSSDGSK VLSYSDDKTI
     RIWDLISGKQ LQVLEGSSSD IKAVSFSSDG SRVVSGTYDG AIRLWDESKI LSSGGRTIRI
     WDISLERKIQ LTEGHVNIMM TVEFSPDGSK IVSGSEDKTV RLWDVQSGRQ IQIFEVRIWD
     VLSGKQLQLL EGHSSWIYKV RFSPDGSKFV SCSHDKTIRI WDIFSGKQIG LLNGHSADVI
     EAQFMPDGNK IMSCSWDHTI RLWDAFSGKQ IQIFEGHTKF VDGIQISSDG SKFVSYSWDM
     TIRVWDVSSG KQLFSFEYKD VTEIQFSSDD TTIVACSKDC TIRLWNVLTG KQIQLLEGHS
     SGVRGIKFSS DGSKIISYSD DKTIRIWNVY SGKQIQVLEG HNGYINCIHL SPNGSKLVSC
     SMDKTIRLWG SDNSKIVDVT ETSVVHYIWR VGVQIGLSME DSIWKNTKGL EDQQKLLVKQ
     RGGIF
//
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