ID X6M0D8_RETFI Unreviewed; 1704 AA.
AC X6M0D8;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=WD-40 repeat-containing protein {ECO:0000313|EMBL:ETO07071.1};
GN ORFNames=RFI_30320 {ECO:0000313|EMBL:ETO07071.1};
OS Reticulomyxa filosa.
OC Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC Reticulomyxidae; Reticulomyxa.
OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO07071.1, ECO:0000313|Proteomes:UP000023152};
RN [1] {ECO:0000313|EMBL:ETO07071.1, ECO:0000313|Proteomes:UP000023152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24332546;
RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL Curr. Biol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETO07071.1}.
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DR EMBL; ASPP01026535; ETO07071.1; -; Genomic_DNA.
DR EnsemblProtists; ETO07071; ETO07071; RFI_30320.
DR Proteomes; UP000023152; Unassembled WGS sequence.
DR CDD; cd00200; WD40; 2.
DR Gene3D; 2.160.20.80; E3 ubiquitin-protein ligase SopA; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 7.
DR InterPro; IPR001646; 5peptide_repeat.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007111; NACHT_NTPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR011041; Quinoprot_gluc/sorb_DH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22847:SF748; TRANSCRIPTIONAL REPRESSOR TUP11; 1.
DR PANTHER; PTHR22847; WD40 REPEAT PROTEIN; 1.
DR Pfam; PF05729; NACHT; 1.
DR Pfam; PF00805; Pentapeptide; 1.
DR Pfam; PF00400; WD40; 14.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 15.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF141571; Pentapeptide repeat-like; 1.
DR SUPFAM; SSF50952; Soluble quinoprotein glucose dehydrogenase; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS00678; WD_REPEATS_1; 9.
DR PROSITE; PS50082; WD_REPEATS_2; 14.
DR PROSITE; PS50294; WD_REPEATS_REGION; 13.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 468..626
FT /note="NACHT"
FT /evidence="ECO:0000259|Pfam:PF05729"
FT REPEAT 1029..1070
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1071..1112
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1113..1154
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1155..1196
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1197..1238
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1239..1280
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1281..1322
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1323..1364
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1365..1406
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1407..1448
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1449..1490
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1533..1574
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1582..1616
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1617..1658
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT COILED 447..474
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1704 AA; 193914 MW; F960CE55221E8401 CRC64;
MHEEMEQKSD KLKKEEEKVE IGETKPGINL QGYCKNTDCL AAKAKIPVWV NIGFGDISFV
SDKTSYCCPD CGQFAIASVV KALVSNSEHL ISANDGSVPV KENNYQCFYT IKPGLSYELK
ANKIRQHSTS LEDLIIRSEA AMQSSELLNL IAELQKYLIT VVKPGQVKDK TRLLEKIQYD
YKGDYNQVFD IGRFTILCDN PTKLQTAVAL LKKAEKFNLI VSEDKDFFER QSKTHHRFHN
IKLYVPKHDV YVEMQATLKS FTTFEGYTVI ENPKLSHLYY ELIRAWRPSD PEEEELRQVS
DETLTKINDV ICEWIDEKGL QKIADRCKLH SDIGILKPPQ LSKKTKTEID NKVSLKMAQF
VYDQLSTFIP ATVKGKAIYV ILYEYYKKYI IGNKNPASCA DFALLLQESR NQEIQEDIAV
LQNLETYIPL QANNYPHGDN KQKHDTYDCH QRVLEFLEEE KKNDQKKVMI IQGKSGSGKS
IFCRYLEQTL WNNYITDSKK PIPVYISFAK IYNKQNERDI VLQALQGKNI SKEIMDAICE
QASFVFIMDG FDEIFDFYRQ NEDVPYFYDR FNLNQWNAKI VVTCRSNVLS EEDIKITLFG
ANQNYTSMMY LWPFTKQQMH SYIEKFAKMH SKNYDEKNSD WTPKQYEETL NNYPNLQKMV
EEPVLLQLIL TVLPSLVKQY GVGSRISRAQ VYEVFNDQWV DIHTQNITSK LAELRIQTNF
TKIKSALKQY CHDLAFDMFI QGGQIAIEPE LQPQNEIWSQ LDPKIQTEKK IEERIQTSKK
RGAKRSIWKK YFNSGSVDKD EPKKEEDNQH QFIIESTEIK TEDNSSSAKP PDVWEKYFDG
DSISKYVLRR SGDNKYQFLH KSCQEYYAAQ KIVLDIISWK PSNFNLSNEQ FQKQFETHVQ
KFLVNYKLLN GESGIIKFIG ERIHDTNPIY ANFKSRLFRI LEASKTNENV SVAAANAITI
LNVVNINMHY RDWNNIKIPH AVLDNAFLEG TDLKNANLNY VSFSQAFLNK ADFTNASMNG
VYFGEYAYLE GHLRGVNGIQ ISPDGKFVAS CSDDKTIRLW DLSSGKQIQV IEGNSDPVTE
VQFSPDGSKI VSCSWDTIAR IWDVATGKQS QTLEGHSGDI TAVQFSPDGS KILSCSRDKT
IRVWDLSSKH SVQILEGHSD FVFGARFSPD GSKIVSCSAD KTVRIWDFPS GRKIQIIEGH
SARVTVVQFS PDGSKILSCS RDRTIRIWDL ETGKQIQSLE GHSADINAAR FSSDCSKIVS
CSDDRTIRIW DVSSGKQLQV LEGHTGDVTG VQFFPKESKI LSCSNDGTIR IWDMSVGRKI
QLSEGHLDCV NKVQFSSDGL KIVSCSDDKT IRLWDVLSGR QIQILEGHTN SVIGVQFAPD
DSKIVSCSWD KTIRIWDTLS GKQLQVLEGH SQVINGIQFS ADGSKVVSYS YDKTIQLWDI
PSGRRIQTLK GHSNDITGVQ FSPDSSKIVS RSVDKTVRLW DIESGKQLQS VEGWIYIANK
MPFSYDGSRI AICSDDKIVI ICDTSTGKQL QLLKGHEGRL ISVQFVPDNS KIITCSWDNT
IRIWDLLSGN QLHMVKVIFD DIVKAQFSPD GSKIISHLGD KTIRIWDSSS GQQILLLEGH
TGAICGVSLS RDGSKIVSCS DDRTIRLWST ENEISSVSKT GLVKCIWQVG VQSYGLSMKD
SIWENTLGLT PQQKLLVEQR GGKF
//
