ID X6M7P5_RETFI Unreviewed; 715 AA.
AC X6M7P5;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=WD-40 repeat protein {ECO:0000313|EMBL:ETO09055.1};
GN ORFNames=RFI_28333 {ECO:0000313|EMBL:ETO09055.1};
OS Reticulomyxa filosa.
OC Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC Reticulomyxidae; Reticulomyxa.
OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO09055.1, ECO:0000313|Proteomes:UP000023152};
RN [1] {ECO:0000313|EMBL:ETO09055.1, ECO:0000313|Proteomes:UP000023152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24332546;
RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL Curr. Biol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETO09055.1}.
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DR EMBL; ASPP01024399; ETO09055.1; -; Genomic_DNA.
DR AlphaFoldDB; X6M7P5; -.
DR EnsemblProtists; ETO09055; ETO09055; RFI_28333.
DR OrthoDB; 1126684at2759; -.
DR Proteomes; UP000023152; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR001293; Znf_TRAF.
DR PANTHER; PTHR22847:SF637; WD REPEAT DOMAIN 5; 1.
DR PANTHER; PTHR22847; WD40 REPEAT PROTEIN; 1.
DR Pfam; PF00400; WD40; 6.
DR Pfam; PF02176; zf-TRAF; 1.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF49599; TRAF domain-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 6.
DR PROSITE; PS50082; WD_REPEATS_2; 6.
DR PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}; Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 131..177
FT /note="TRAF-type"
FT /evidence="ECO:0000259|Pfam:PF02176"
FT REPEAT 391..434
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 435..482
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 483..526
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 527..580
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 581..621
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 622..674
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT COILED 193..227
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 715 AA; 82383 MW; 41D94437370DA177 CRC64;
MIKLENQTTE EKKSGEAFLS AQQACFNKNY FLELDQHDQL NDFICLICKQ IVYEPFEINC
TQHQNLDGLL LVGEHCLKKF LNDNPNSCPV EPHGTCQYAK SRLAQRYINE LKITCPRQLA
QSQQQKGKAN DIICNFVGKL KELNAHLNNS CPLNSVDCWF KPFGCNHNLY KHELQEHLTS
KMRFHFDLVI KSFDTLKQTI QSLQNELIQL QSQNQQLHLQ IQSKKKKDEK DLALLKNNTV
LEYNKKYQYF LNLFFFYIYN EIIVEIAKLK KATNNKLEQI HVQEDIQKSM EIIQSKEKQQ
LRKEIEINNI KKEDESGLPE LSVGLDNMET DFFDSDKQIS SHHDQQKESF KTQDYKSNIP
NKNTDIEFKD KFFSSTANLD SFYHAKLMKT FTGHSGIVWS VDYSPFDNGR FLCSGSCDKT
VCLWDVNASK LLKIFNGHSD YIRCVKFSPY HYHKYSRYII CSASIDETIR FWDFESKNES
QILKGHNLGI CSIQFSPFSN GQYLCSGSWD KTVRLWDIET LKLLQIFNGH TNRIWCVTFS
PLQSNANVGI VGGSGYTICS GSSDDTIRLW DVGTAKELID FKGHTDGVMS VKYLNENIIC
SGSVDKTIRL WDIRSKKDIN VFKGHADDIN CVDFPPFGSS CDGIGFSATN IICSGSWDNT
IRFWDVRTNR QLHEIKGCDN DGGIDCLQFA PLKSKCDYST TLCYGSLKGF IRMWE
//
