ID X6MPC1_RETFI Unreviewed; 919 AA.
AC X6MPC1;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=WD-40 repeat-containing protein {ECO:0000313|EMBL:ETO15292.1};
GN ORFNames=RFI_22074 {ECO:0000313|EMBL:ETO15292.1};
OS Reticulomyxa filosa.
OC Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC Reticulomyxidae; Reticulomyxa.
OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO15292.1, ECO:0000313|Proteomes:UP000023152};
RN [1] {ECO:0000313|EMBL:ETO15292.1, ECO:0000313|Proteomes:UP000023152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24332546;
RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL Curr. Biol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETO15292.1}.
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DR EMBL; ASPP01019269; ETO15292.1; -; Genomic_DNA.
DR AlphaFoldDB; X6MPC1; -.
DR EnsemblProtists; ETO15292; ETO15292; RFI_22074.
DR Proteomes; UP000023152; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR001293; Znf_TRAF.
DR PANTHER; PTHR44129; WD REPEAT-CONTAINING PROTEIN POP1; 1.
DR PANTHER; PTHR44129:SF13; WD REPEAT-CONTAINING PROTEIN POP1; 1.
DR Pfam; PF00400; WD40; 4.
DR Pfam; PF02176; zf-TRAF; 1.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF82171; DPP6 N-terminal domain-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}; Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 132..168
FT /note="TRAF-type"
FT /evidence="ECO:0000259|Pfam:PF02176"
FT REPEAT 640..675
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 683..724
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 733..766
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 885..919
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 244..279
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 184..222
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 244..274
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 919 AA; 107856 MW; 7BE5F92F5D7D4F9A CRC64;
MEEKTSKEND LKSILQQQSC FDKNWILQLN QNEKINDFIC LICKQVANNP IEINCPQHKN
MDESLIVGDS CLRQFLSQNS NSCPIELHNN CSYLQNELVK QYIGELDVIC PRQFEQGQKP
ELMNCDFKGK IKQVDDHLEN SCCLQVVKCW FEPFGCNHTC PRSMIQDHLI SNMRLHFVLV
VKSFETLKQT IQQYQDEIKE LKRKKDEDIS LLKQQLAQYQ NTTLEMKKLG KHIELKMDQT
DLKEEENYVE EGEEDERVEE SGEEDSDEEE DSNKEKDSVE EKISSNRIFI IIGLPILLEN
TRCIAYKNEI IMFGGSNTRK CYSYHTIKGK LKFICKCSFD INTYCVVKRI DSDTNGITLL
SFGEKGEHIL MMKYVSVWKN RSKRLATTYN KWKALMDNHN NKIIIERSNV QVVIGGSNNH
LLFINSYTNI NRPYFISIAE NKMMFFCNKQ GLSIEYNEKN NTFHYQILSI CDNIDLIEYT
HIYKTNKIYK YSIIDNQWEM SRHGALRNLT SVLSKDNKFI YHFGIYNSTW DPQNKDTFGY
IKINTNELLE DKENWIMKNP KKRIIEDKEV VQTAEMYNEL EDMKGRDINI SKFKKKKEIE
MIIKHWLNLL LINKIGWIED FNIIILRYIL HKYFKPWRVF EVCSDQINNI RFSPDGTKIV
LSSNDNTIQI WNIESEIHDI KNIKGHSDCV NDAQFSHDGT MIVSCSNDKT IRLWDVNSYN
EIKKFGEYSD NIITNVEFSS DRKMIVAFND KTLEIWDIQS RKLIKALFYD DCIVDVKMLS
NDQKIFVATK RNIEVFDIIS SEAQTICNEW CETAQFSPNG LNIVRYSNNT IELVDLMSET
KVKEQTSSKP TKLKYFPSEQ TILMCCEDNI IRLWDIQLRM RIQELEGHSE KIKGCDISSD
GNTIISLSND NTIRLWKVL
//
