ID X6P1R7_RETFI Unreviewed; 1783 AA.
AC X6P1R7;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=WD-40 repeat protein {ECO:0000313|EMBL:ETO32083.1};
GN ORFNames=RFI_05036 {ECO:0000313|EMBL:ETO32083.1};
OS Reticulomyxa filosa.
OC Eukaryota; Sar; Rhizaria; Retaria; Foraminifera; Monothalamids;
OC Reticulomyxidae; Reticulomyxa.
OX NCBI_TaxID=46433 {ECO:0000313|EMBL:ETO32083.1, ECO:0000313|Proteomes:UP000023152};
RN [1] {ECO:0000313|EMBL:ETO32083.1, ECO:0000313|Proteomes:UP000023152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24332546;
RA Glockner G., Hulsmann N., Schleicher M., Noegel A.A., Eichinger L.,
RA Gallinger C., Pawlowski J., Sierra R., Euteneuer U., Pillet L.,
RA Moustafa A., Platzer M., Groth M., Szafranski K., Schliwa M.;
RT "The Genome of the Foraminiferan Reticulomyxa filosa.";
RL Curr. Biol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETO32083.1}.
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DR EMBL; ASPP01004499; ETO32083.1; -; Genomic_DNA.
DR EnsemblProtists; ETO32083; ETO32083; RFI_05036.
DR OrthoDB; 5384774at2759; -.
DR Proteomes; UP000023152; Unassembled WGS sequence.
DR CDD; cd00200; WD40; 3.
DR Gene3D; 2.160.20.80; E3 ubiquitin-protein ligase SopA; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 6.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007111; NACHT_NTPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22847:SF748; TRANSCRIPTIONAL REPRESSOR TUP11; 1.
DR PANTHER; PTHR22847; WD40 REPEAT PROTEIN; 1.
DR Pfam; PF05729; NACHT; 1.
DR Pfam; PF00400; WD40; 14.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 14.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF141571; Pentapeptide repeat-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS00678; WD_REPEATS_1; 9.
DR PROSITE; PS50082; WD_REPEATS_2; 14.
DR PROSITE; PS50294; WD_REPEATS_REGION; 13.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000023152};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 614..772
FT /note="NACHT"
FT /evidence="ECO:0000259|Pfam:PF05729"
FT REPEAT 1139..1180
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1181..1222
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1223..1264
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1265..1306
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1307..1348
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1349..1390
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1391..1425
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1433..1474
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1475..1516
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1524..1558
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1559..1593
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1600..1641
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1642..1683
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1684..1716
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT COILED 259..290
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1783 AA; 203443 MW; 05B43B0CDEA83FD8 CRC64;
MLLYTNMNIL HGKKKIMSNC VLTDSMKCKG GMQDNNKNNR SDINEKDRTY AKEIKTLVRL
FGDSINEEEL RQKIEYHSGN IELVIKELVQ QILIMNIYLY MHIKHKLEAE PKTNELEEKT
EQVIYKNHFI CFCITYFKQE QGNTMNEINN NNKSVQKEME ITEIGETKPG INLQGYCINE
NCLASKAKLP VWINIGFYNI TFVSDKTSFS CPDCKKSTVN LIAKAMFYNS EHSICANGSI
PVKDNNYQSL YTIKPGLSYK LTANKVRQHA KNIEDLRERS EHAMDSIEIN NLVTELQKYE
ITVVKPPSLK GNERLLEKIQ ADYGGDFNQV FDIGRFTILC DNSTKLQTAV AVMKKAEQFN
LIVSEDKDFF EKKSKTHHRF HNIRLYVPKH DVYIEMQATL KNFTTLEGYT VIENPNLSHL
FYEHIRAWKP NNPLEEELKQ ASDETLTKIN DVICEWIDAK EIKKIANRYK PHSEIRILKP
PQLKGINEEE VNAKNDIPLK LIKFVYDQLC KFNPKEMKGQ AVYVLSFEYF KKHIMGEMNP
ASCVDVISIL KESRKQELEE DTTVLQALEM YIPLQANNYP YTDNDDKNNN SYDCHQHIID
FLEEEKKEKK SEQVAVLQGK SGSGKSLFCR HLEGVLWESY VNGLTTFIPI CISLPKCYSE
LNEKQIISQA LQMKQINKEI IDVICENISF VFILDGFDEI FDKYNRNKNN ERYFYDRFNL
CEWNAKIIVT CRSHVLNDED IQHVLIGSKN ITTTSMIYLW PFSKGQMNGY IDKFVKMNKK
NKINDNLDWT VQKYEETLKH FPNLNKMMEE PFLLRMILTV LPSLMKQHPI GTKISKAQIY
EAFNEQWIDI YVKNIVNKLS ELRIQTNLKK IKAAFQQYCQ DLAFEMFIQG NQVATENDYK
ENENDNISSK LDPIIEIETK HTDEKLEPKV NNTKISVEKT QDIWKQYFNG DSIAKYVLRK
VSGNKYQFLH KSCQEYFAAQ KIIFDIISWK PSAVNINNQQ FQQQFEMHAQ QFLINRKLLN
EEMGIILFIA NRIYDDNLLF VNLKSRLFRL IESSKTNSNV SIAAANAATI LNMARVSMSH
QNWDKINISH AILDYGFLEG TSFKGAVLDN VSFFRACLSY TNFTNASVNQ VNFGEYGYLK
GHSDCVTSVQ FSPDGNRIVS GSEDNTIRLW DALSGKQIQC FEDHTGEVTS VQFSPDGKRI
VSGSYDNTVR LWDVSSGQQI QCFEGHTDCV VSVQFSPSGD KIISGSFDNT IRLWDPLSGK
QIQSLEGHTN IVTSVHFSHD GNQIVSGSDD QTIRLWSTSS GKQIQCFEGH NGNVTSVTFS
PDCNRIVSGS SDKTIRLWDV SSGKQIQSIE GHSGHVLSVQ FSPDGNRIVS GSFDKTIRLW
DVSSGKQVQS FEGHSGHVLS VQFSPDGNKL VSGSYDETIR LWDVSLKIQT QSLEVHSRIV
NSVQFSPDGS KIVSGSDDKT IRLWNASSGL QIQSLEGHSD CVTSAQFSPD GGKILSVSVD
HSIRLWDVTS GKQIQFFDIE SFFVRSFQFS PNGDRIVFGS FDGIIRLLDL SSGKQIQCFE
GHTKGITSVN FSPDGGRIVS GSHDKIIHLW DISGKRIQSF EGHTNTITFV QFSHDSNRIV
SGSDDKTIRL WDTSSGKQIQ CFEGHTKDVT SVRFSPDRNR IVSSSKDKTI RLWDIQSGQQ
IQSIEGHSDH VTSVQFSPDG NRILSASGDS TIRLYSNSSN LIHFTSDDKK SVCSQNERIS
LWKCIWQGGV QRSGLSLRDS TWKDAKGLTL LQMSVVEQYG GTF
//
