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Database: UniProt
Entry: Y021_METJA
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ID   Y021_METJA              Reviewed;         375 AA.
AC   Q60332;
DT   01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1997, sequence version 1.
DT   27-MAR-2024, entry version 116.
DE   RecName: Full=Putative glycyl-radical enzyme activating enzyme MJ0021 {ECO:0000305};
DE            Short=GRE activating enzyme MJ0021 {ECO:0000305};
DE            EC=1.97.1.- {ECO:0000250|UniProtKB:P0A9N4};
GN   OrderedLocusNames=MJ0021;
OS   Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
OS   10045 / NBRC 100440) (Methanococcus jannaschii).
OC   Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC   Methanocaldococcaceae; Methanocaldococcus.
OX   NCBI_TaxID=243232;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
RX   PubMed=8688087; DOI=10.1126/science.273.5278.1058;
RA   Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G.,
RA   Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R.,
RA   Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R.,
RA   Kirkness E.F., Weinstock K.G., Merrick J.M., Glodek A., Scott J.L.,
RA   Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R.,
RA   Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D.,
RA   Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P.,
RA   Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
RT   "Complete genome sequence of the methanogenic archaeon, Methanococcus
RT   jannaschii.";
RL   Science 273:1058-1073(1996).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=glycyl-[protein] + reduced [flavodoxin] + S-adenosyl-L-
CC         methionine = 5'-deoxyadenosine + glycin-2-yl radical-[protein] + H(+)
CC         + L-methionine + semiquinone [flavodoxin]; Xref=Rhea:RHEA:61976,
CC         Rhea:RHEA-COMP:10622, Rhea:RHEA-COMP:14480, Rhea:RHEA-COMP:15993,
CC         Rhea:RHEA-COMP:15994, ChEBI:CHEBI:15378, ChEBI:CHEBI:17319,
CC         ChEBI:CHEBI:29947, ChEBI:CHEBI:32722, ChEBI:CHEBI:57618,
CC         ChEBI:CHEBI:57844, ChEBI:CHEBI:59789, ChEBI:CHEBI:140311;
CC         Evidence={ECO:0000250|UniProtKB:P0A9N4};
CC   -!- COFACTOR:
CC       Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC         Evidence={ECO:0000250|UniProtKB:P0A9N4};
CC       Note=Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3
CC       cysteines and an exchangeable S-adenosyl-L-methionine.
CC       {ECO:0000250|UniProtKB:P0A9N4};
CC   -!- SIMILARITY: Belongs to the organic radical-activating enzymes family.
CC       {ECO:0000305}.
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DR   EMBL; L77117; AAB98003.1; -; Genomic_DNA.
DR   PIR; E64302; E64302.
DR   RefSeq; WP_010869513.1; NC_000909.1.
DR   AlphaFoldDB; Q60332; -.
DR   SMR; Q60332; -.
DR   STRING; 243232.MJ_0021; -.
DR   PaxDb; 243232-MJ_0021; -.
DR   EnsemblBacteria; AAB98003; AAB98003; MJ_0021.
DR   GeneID; 1450859; -.
DR   KEGG; mja:MJ_0021; -.
DR   eggNOG; arCOG00932; Archaea.
DR   HOGENOM; CLU_053467_0_0_2; -.
DR   InParanoid; Q60332; -.
DR   OrthoDB; 372128at2157; -.
DR   PhylomeDB; Q60332; -.
DR   Proteomes; UP000000805; Chromosome.
DR   GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR   CDD; cd01335; Radical_SAM; 1.
DR   Gene3D; 3.20.20.70; Aldolase class I; 1.
DR   InterPro; IPR013785; Aldolase_TIM.
DR   InterPro; IPR040087; MJ0021-like.
DR   InterPro; IPR001989; Radical_activat_CS.
DR   InterPro; IPR007197; rSAM.
DR   PANTHER; PTHR43288; BIOTIN SYNTHASE-RELATED PROTEIN, RADICAL SAM SUPERFAMILY; 1.
DR   PANTHER; PTHR43288:SF1; GLYCYL-RADICAL ENZYME ACTIVATING ENZYME MJ0021-RELATED; 1.
DR   Pfam; PF13353; Fer4_12; 1.
DR   Pfam; PF04055; Radical_SAM; 1.
DR   SFLD; SFLDS00029; Radical_SAM; 1.
DR   SFLD; SFLDG01108; Uncharacterised_Radical_SAM_Su; 1.
DR   SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR   PROSITE; PS01087; RADICAL_ACTIVATING; 1.
DR   PROSITE; PS51918; RADICAL_SAM; 1.
PE   3: Inferred from homology;
KW   4Fe-4S; Iron; Iron-sulfur; Metal-binding; Oxidoreductase;
KW   Reference proteome; S-adenosyl-L-methionine.
FT   CHAIN           1..375
FT                   /note="Putative glycyl-radical enzyme activating enzyme
FT                   MJ0021"
FT                   /id="PRO_0000200544"
FT   DOMAIN          23..246
FT                   /note="Radical SAM core"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01266"
FT   BINDING         38
FT                   /ligand="[4Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:49883"
FT                   /ligand_note="4Fe-4S-S-AdoMet"
FT                   /evidence="ECO:0000250|UniProtKB:P0A9N4"
FT   BINDING         42
FT                   /ligand="[4Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:49883"
FT                   /ligand_note="4Fe-4S-S-AdoMet"
FT                   /evidence="ECO:0000250|UniProtKB:P0A9N4"
FT   BINDING         44..46
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000250|UniProtKB:P0A9N4"
FT   BINDING         45
FT                   /ligand="[4Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:49883"
FT                   /ligand_note="4Fe-4S-S-AdoMet"
FT                   /evidence="ECO:0000250|UniProtKB:P0A9N4"
FT   BINDING         87
FT                   /ligand="S-adenosyl-L-methionine"
FT                   /ligand_id="ChEBI:CHEBI:59789"
FT                   /evidence="ECO:0000250|UniProtKB:P0A9N4"
SQ   SEQUENCE   375 AA;  43446 MW;  5AEA168D21383CC8 CRC64;
     MNVEEIEKYL EENFDKLPEG CKQCVKGGKL VLFITGICNN NCYYCPLSEK RKNKDVIYAN
     ERLITTVEEA IEEAKLCSSK GVGITGGNPL LKINRTVKFL KALKKEFDEF HAHLYTTPET
     VNEENLKLLK EADLDEIRLH PTKIFNEGYD EEYIKFLCNK LNLCNKYIED VGVEIPAIPN
     MENEILKLAE AIDGIAKFMN INELEFSEEN YHELEKRGFM PKDDVSNAIA GSEETALKVI
     KEFKGDLFIN YCPSVLKDAI QMRNRLINRA KNVAKPYEVI TEDGLLLRGI MIFDNEDDLK
     EMAEILEENE IEFEIIDKNI CLNPFILEDI IEEMKRQRFP ITFSAYISEL YPTADALEVE
     RIPLITKKLK FRRRR
//
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