GenomeNet

Database: UniProt
Entry: Y0KHN9_9PROT
LinkDB: Y0KHN9_9PROT
Original site: Y0KHN9_9PROT 
ID   Y0KHN9_9PROT            Unreviewed;       155 AA.
AC   Y0KHN9;
DT   11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT   11-JUN-2014, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   SubName: Full=Cytochrome c556 {ECO:0000313|EMBL:EUJ10629.1};
GN   ORFNames=Meth11DRAFT_1455 {ECO:0000313|EMBL:EUJ10629.1};
OS   Methylophilaceae bacterium 11.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
OC   Methylophilaceae.
OX   NCBI_TaxID=1101195 {ECO:0000313|EMBL:EUJ10629.1, ECO:0000313|Proteomes:UP000022668};
RN   [1] {ECO:0000313|EMBL:EUJ10629.1, ECO:0000313|Proteomes:UP000022668}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=11 {ECO:0000313|EMBL:EUJ10629.1,
RC   ECO:0000313|Proteomes:UP000022668};
RG   DOE Joint Genome Institute;
RA   Chistoserdova L., Huntemann M., Han J., Chen A., Kyrpides N.,
RA   Mavromatis K., Markowitz V., Palaniappan K., Ivanova N., Schaumberg A.,
RA   Pati A., Liolios K., Nordberg H.P., Cantor M.N., Hua S.X., Woyke T.;
RL   Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- PTM: Binds 1 heme group per subunit. {ECO:0000256|PIRSR:PIRSR000027-2}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EUJ10629.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; JCKJ01000001; EUJ10629.1; -; Genomic_DNA.
DR   AlphaFoldDB; Y0KHN9; -.
DR   STRING; 1101195.Meth11DRAFT_1455; -.
DR   PATRIC; fig|1101195.3.peg.1417; -.
DR   eggNOG; COG3909; Bacteria.
DR   Proteomes; UP000022668; Unassembled WGS sequence.
DR   GO; GO:0042597; C:periplasmic space; IEA:InterPro.
DR   GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR   Gene3D; 1.20.120.10; Cytochrome c/b562; 1.
DR   InterPro; IPR010980; Cyt_c/b562.
DR   InterPro; IPR002321; Cyt_c_II.
DR   InterPro; IPR012127; Cyt_c_prime.
DR   Pfam; PF01322; Cytochrom_C_2; 1.
DR   PIRSF; PIRSF000027; Cytc_c_prime; 1.
DR   SUPFAM; SSF47175; Cytochromes; 1.
DR   PROSITE; PS51009; CYTCII; 1.
PE   4: Predicted;
KW   Electron transport {ECO:0000256|ARBA:ARBA00022982};
KW   Heme {ECO:0000256|ARBA:ARBA00022617, ECO:0000256|PIRSR:PIRSR000027-2};
KW   Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|PIRSR:PIRSR000027-1};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW   ECO:0000256|PIRSR:PIRSR000027-1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000022668};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transport {ECO:0000256|ARBA:ARBA00022448}.
FT   SIGNAL          1..21
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           22..155
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5004987535"
FT   BINDING         142
FT                   /ligand="heme c"
FT                   /ligand_id="ChEBI:CHEBI:61717"
FT                   /note="covalent"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000027-2"
FT   BINDING         145
FT                   /ligand="heme c"
FT                   /ligand_id="ChEBI:CHEBI:61717"
FT                   /note="covalent"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000027-2"
FT   BINDING         146
FT                   /ligand="heme c"
FT                   /ligand_id="ChEBI:CHEBI:61717"
FT                   /ligand_part="Fe"
FT                   /ligand_part_id="ChEBI:CHEBI:18248"
FT                   /note="axial binding residue"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000027-1"
SQ   SEQUENCE   155 AA;  16986 MW;  908A0EC458568F4C CRC64;
     MKKLSLLLTS LALLNASYAY AGPIEDQIKY RQSAYSFIGW NTNKIKSQLD KPETFSKEDV
     IAAANAIAAA ANSGLGALYG PGTDQGEGWH KTRLKPEFFQ KPEEAKKVAI AFNLEANEFA
     KVAETGDPVQ IKAKFGKLTQ SCKACHDSFR EKDPK
//
DBGET integrated database retrieval system