ID Y845_PEDPA Reviewed; 113 AA.
AC Q03FW7;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 14-NOV-2006, sequence version 1.
DT 27-MAR-2024, entry version 85.
DE RecName: Full=UPF0122 protein PEPE_0845 {ECO:0000255|HAMAP-Rule:MF_00245};
GN OrderedLocusNames=PEPE_0845;
OS Pediococcus pentosaceus (strain ATCC 25745 / CCUG 21536 / LMG 10740 /
OS 183-1w).
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Pediococcus.
OX NCBI_TaxID=278197;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25745 / CCUG 21536 / LMG 10740 / 183-1w;
RX PubMed=17030793; DOI=10.1073/pnas.0607117103;
RA Makarova K.S., Slesarev A., Wolf Y.I., Sorokin A., Mirkin B., Koonin E.V.,
RA Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V.,
RA Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M.,
RA Hawkins T., Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A.,
RA Baldwin K., Lee J.-H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W.,
RA Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y.,
RA Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J.R., Hutkins R.,
RA O'Sullivan D., Steele J., Unlu G., Saier M.H. Jr., Klaenhammer T.,
RA Richardson P., Kozyavkin S., Weimer B.C., Mills D.A.;
RT "Comparative genomics of the lactic acid bacteria.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006).
CC -!- FUNCTION: Might take part in the signal recognition particle (SRP)
CC pathway. This is inferred from the conservation of its genetic
CC proximity to ftsY/ffh. May be a regulatory protein. {ECO:0000255|HAMAP-
CC Rule:MF_00245}.
CC -!- SIMILARITY: Belongs to the UPF0122 family. {ECO:0000255|HAMAP-
CC Rule:MF_00245}.
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DR EMBL; CP000422; ABJ67905.1; -; Genomic_DNA.
DR RefSeq; WP_002833574.1; NC_008525.1.
DR AlphaFoldDB; Q03FW7; -.
DR SMR; Q03FW7; -.
DR STRING; 278197.PEPE_0845; -.
DR GeneID; 33062454; -.
DR KEGG; ppe:PEPE_0845; -.
DR eggNOG; COG2739; Bacteria.
DR HOGENOM; CLU_129218_1_0_9; -.
DR OrthoDB; 6392at2; -.
DR Proteomes; UP000000773; Chromosome.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR HAMAP; MF_00245; UPF0122; 1.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR007394; UPF0122.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR40083; UPF0122 PROTEIN CBO2450/CLC_2298; 1.
DR PANTHER; PTHR40083:SF1; UPF0122 PROTEIN CBO2450_CLC_2298; 1.
DR Pfam; PF04297; UPF0122; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
FT CHAIN 1..113
FT /note="UPF0122 protein PEPE_0845"
FT /id="PRO_1000012536"
SQ SEQUENCE 113 AA; 13736 MW; 2C49CBFB9E13D9D8 CRC64;
MEIEKNNRIN SLLEFYEQLL TPKQKEYITL YYADDYSLGE ISEEFQVSRQ AVYDNIKRTV
NILEKYEQQL HLLSNFEVRN AKFDQIRAYI NQKYPEDTEL KHFLDDLEKS EEE
//
