KEGG   Undibacterium parvum: EJN92_01110
Entry
EJN92_01110       CDS       T05754                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
  KO
K03703  excinuclease ABC subunit C
Organism
upv  Undibacterium parvum
Pathway
upv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:upv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EJN92_01110 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:upv03400]
    EJN92_01110 (uvrC)
DNA repair and recombination proteins [BR:upv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EJN92_01110 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH HHH_5 UVR HHH_2 LSDAT_euk
Other DBs
NCBI-ProteinID: AZP10749
UniProt: A0A3S9HF45
Position
complement(246819..248738)
AA seq 639 aa
MSDARVDLNADTQNDEARLQLLETVAKLPNLPGVYRYFDAQDHVLYVGKARDLKKRVSSY
FQKTLSSPRIAMMVGKISRLETTVTRSEAEALILENTLIKTLRPRYNILFRDDKSYPYLK
ITNEQSPRMTYYRGAIDKKHQYFGPFPSAWAVKESMQLLQKIFLLRSCEDSVFANRTRPC
LLHQIQRCSAPCVDFITHEDYLVDVDNAAKFLRGRQSEVMQNLESKMLGFAEQLKFEQAA
LVRNQMSALSKILHQQSMETTGDSDIDVIAVIVEGGRACVNLAMVRGGRHLGDRAYFPSQ
VAEVEAMSDESIDVAVLTAFLAQHYADQFIPSQLILNIEFDAPDLMLALMAQCGHKIHCS
FQPQEQRRAWLEMAVKGAQLSLARMLSEQGSQQSRTRSLCLALELEVDDIDQLRIECFDI
SHTQGEATQASCVVFHHHAMQNSEYRRFNIKDITPGDDYAAMRQVIHRRYEKMSVTRPLD
AGGDADMASIPVMPDVVLIDGGKGQVEVARQVFEELGLDVSLIVGVCKGEGRRVGLETLV
FVDGRAAKELGKESAALMLIAQIRDEAHRFAITGMRAKRAKARQTSQLEEIEGVGPKRRQ
RLLVRFGGLKGVADASIEDLIAVEGISRVLAEEIYKRLR
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgtctgacgctagagttgatttaaacgctgatacacaaaacgacgaggcgcggttacag
ttgctcgagacggtcgcaaaattacccaacttacccggtgtttatcgatatttcgacgcg
caggatcatgtcttatacgtgggtaaagcgcgggatttaaaaaaacgtgtttccagctac
tttcaaaaaactttgagcagtccccgtatcgcgatgatggttggtaaaatttcgcgcttg
gagaccacggtcacgcgtagcgaagcagaagccctgattttagagaatactttaatcaaa
actttacgacctcgctacaatattctattccgtgatgataagtcctatccctacctaaaa
atcaccaacgagcaatcgccacgaatgacgtattatcgtggggcaatcgataagaaacat
caatactttggcccttttccttcagcctgggcggtcaaagaatccatgcagcttttgcag
aaaattttccttttgcgtagttgtgaagatagtgtgtttgcgaatcgtactcgcccttgt
ttactccatcaaattcaaagatgcagcgcgccctgtgtcgattttattacgcatgaagac
tatctggtcgatgtcgacaacgctgccaaatttttgcgcgggcggcagtcagaagtaatg
cagaatttagaatccaaaatgctcggttttgcggagcaacttaagttcgaacaagcagct
ttagtacgcaatcaaatgtcggcactctccaaaatattgcatcagcaaagcatggaaacc
accggcgatagtgatattgatgtgattgccgtgatcgtcgagggggggcgcgcttgcgtg
aatcttgctatggttcgcggtggtcgacatttgggggatcgggcttattttcctagtcag
gtggctgaggtagaggcaatgagcgatgagtctatcgacgtggcggtattaactgctttt
ttagcgcaacattatgcggatcagttcatcccttcccaattgatcttgaatatagaattc
gatgcaccggatttgatgctcgctttgatggcgcaatgcggacataaaattcattgttcg
tttcagccgcaggagcagcgccgtgcttggttggagatggccgttaagggggctcaactg
tcattggcacggatgttgtctgagcaaggctcgcaacaatcgagaacgcgttctttatgc
ctcgctttggaattggaagtcgacgacattgatcaactgcgcatagagtgttttgatatt
agtcacacccagggtgaggcgactcaagcctcctgtgtggtgtttcatcatcatgccatg
caaaattccgagtatcgacgattcaatattaaggatattacgcctggcgatgactatgcg
gcgatgcgccaggtcatccatagacgatatgaaaaaatgagcgtgacaagaccgcttgat
gcgggcggggatgccgacatggcgtcgatacccgtgatgccagatgtagttttaatcgat
ggtggtaaaggacaggttgaggtagcgcgtcaggtgtttgaggaactcggtctcgacgtc
agtttaattgtcggtgtatgtaaaggggaggggcgcagagttggtttggagaccttggtg
tttgttgatggccgcgctgctaaagagttgggcaaagagtccgcagccttaatgttgatt
gcgcaaatcagggatgaggcccatcgcttcgcgattactggtatgcgtgccaagcgggcc
aaggccaggcagacttctcagctcgaagagatcgagggcgtgggccctaagcgcaggcag
cgcttattggttcgctttggtggtttaaaaggtgtggcggatgctagtatcgaggactta
atcgcggtggaaggcatctcgcgtgtgcttgcagaagaaatatataagcgcttgcgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system