KEGG   Undibacterium parvum: EJN92_19325Help
Entry
EJN92_19325       CDS       T05754                                 

Gene name
recD
Definition
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
upv  Undibacterium parvum
Pathway
upv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:upv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    EJN92_19325 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:upv03400]
    EJN92_19325 (recD)
Enzymes [BR:upv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     EJN92_19325 (recD)
DNA repair and recombination proteins [BR:upv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     EJN92_19325 (recD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: AAA_30 AAA_19 UvrD_C_2 Viral_helicase1 Helicase_RecD AAA_11 SH3_13 AAA_22 UvrD-helicase PhoH DUF2075 AAA_28 ResIII UvrD_C AAA_16
Motif
Other DBs
NCBI-ProteinID: AZP14669
UniProt: A0A3Q9BXA6
Position
complement(4422726..4424768)
Genome map
AA seq 680 aa AA seqDB search
MRSADLTNAATFQVIPDNLQTLFETFDEFAQAGVLRRLGPALARFMASLGMQDPAQLLAC
TLLSELEGRGHSCLILQELADDPCGLLGWKSAQWQALAELAQPLPNGSNEWRARLSNCPH
IWLAQTQADQQQPLVLDQDRLYLRRYWTDESNVAKAIRARAGSQRTVDLALAKHWLNKLF
DSNDLSAKSAESAESASAPDWQKIACAIALRSQLSIITGGPGTGKTYTVARLLALLFASA
AKPENLRIALAAPTGKAAARLKQAIDAALQELSDKVGSALPLAQLSNRMGAARTLHSLLG
ARPDTRLFAHHSGNQLDLDVLIVDEASMVHLEMMAAILAALPASTMLILLGDKDQLASVE
AGAVLGDLCRDAEAGGYNDQTLDYLSSSCGVKLPAQFRGDAAAMGQQTVMLRQSRRFGGP
IGKLALAVNSGNSAAAVASLRAGDSSNLHWITQAQSKQILELALNGRSGAEGGYRSYLSL
LNQQPRVYADPASLVAEHELWALQLLQRFESFRILCAVREGAWGVAGLNTAIELALESQK
LIKRHTEWYIGRPVMITRNDHGTGVYNGDIGICLPDPLRADAPRVYFLEGQTVRSVLATR
LREVVTAYAMTVHKSQGSEFSHTVLVLPEVASPVLSRELVYTGITRARSNFTLVTPVASV
FEEALKRRTLRASGLTGLLA
NT seq 2043 nt NT seq  +upstreamnt  +downstreamnt
atgcgcagtgcagacctcacgaatgccgctactttccaggttattccagacaatttgcag
actttgtttgagaccttcgacgaattcgcacaagctggcgtgttgcgtcggcttggccct
gccttagcacgctttatggcgtccttgggcatgcaagacccggcgcaacttttggcttgc
acgctattatcagaactcgaaggtcgcggccatagttgcctgatattgcaggaactagcg
gatgatccttgtggcttattaggctggaaaagcgcgcaatggcaggccttggcggaacta
gcgcagccgctcccgaatggatcgaacgaatggcgtgcgcgtctcagcaattgcccgcac
atctggctagcgcagacgcaagcagatcaacaacagccgctggtgctggatcaagaccga
ctgtatttgcgacgttactggaccgatgagagcaatgtcgcaaaggcgatacgcgcacga
gcaggatctcaacgcacagtcgatctggcgctagccaaacactggctcaataagctgttt
gatagcaacgacctcagtgcaaaaagtgcagaaagtgcagagagtgccagtgcgccagac
tggcaaaaaatcgcctgcgcgattgccctgcgtagccaactcagtatcatcactggcggc
cccggcaccggcaaaacctataccgtggcgcgcttactggcgctgctgttcgctagtgct
gcaaaaccagaaaatttacgtatcgcactggccgcgcctaccggcaaggccgccgcccga
cttaaacaagcgatagacgccgcgctgcaagaactcagtgataaagttggcagcgccctg
cccttggcgcaattaagtaaccgtatgggtgcggcgcgcacgctgcacagcttgcttggt
gcgcgtccggatacccgcctgtttgcccatcacagcggcaatcaactcgatctcgatgtg
ctgatcgtggacgaggcttcgatggtacatctggagatgatggcggcgatacttgcagcc
ctgcccgccagcaccatgttgatactgctgggcgataaagatcagttggcctcggtagaa
gctggcgcggtactcggcgacttatgccgggatgccgaggccggcggctataacgatcag
acgctagactacttgagcagtagttgcggggtcaagctgcctgcgcagttccgcggtgat
gctgccgccatgggccagcaaaccgtgatgctgcgccagagtcggcgcttcggtgggcct
atcggcaaactggcactggcggtcaacagcggcaatagcgccgccgcagtggctagtctg
cgcgctggcgatagcagcaacttgcattggattacacaagctcagtctaaacagatcttg
gaattagcgctaaacggtcgcagcggcgcggaaggcggttaccgcagttatctgtcactg
ctgaaccagcagccgcgtgtttatgcagatcccgccagtctggtggcagaacatgagctg
tgggccttgcaactactccagcgttttgaaagttttcgtatcttatgtgcggtgcgcgaa
ggcgcatggggagtggctggtttaaatactgccatcgagctcgctctggagagccaaaaa
ctgatcaagcgtcacaccgaatggtatataggccggccagtgatgatcacacgcaatgat
cacggtaccggggtttacaacggcgacatcggcatctgcctgcccgatccgttgcgcgca
gacgccccacgcgtctactttttagaagggcaaacagtacgcagcgtactggccacccgt
ctgcgcgaggtggtgaccgcctacgccatgacggtgcataaatcccagggttcggaattt
agtcacaccgtgctggtcttgcccgaagtcgcatcgcccgtgctcagtcgcgaactggtg
tacaccggcatcacccgcgccagaagcaatttcaccctagtcacaccagtcgcatcggtg
tttgaagaagccttaaaacgccgcaccctacgcgccagcggtttgaccggcttacttgcc
tag

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