KEGG   Uncinocarpus reesii: UREG_00711
Entry
UREG_00711        CDS       T01132                                 
Name
(RefSeq) hypothetical protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
ure  Uncinocarpus reesii
Pathway
ure03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UREG_00711
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ure03019]
    UREG_00711
Messenger RNA biogenesis [BR:ure03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     UREG_00711
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     UREG_00711
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 8443657
NCBI-ProteinID: XP_002541197
UniProt: C4JDI5
AA seq 828 aa
MSFFGFDTTLPNDRLPPQESRGIFETPDPFAEVARATAHGFHGDDDAIDFEDTYDGLGDR
LDETQDAFNDDTFGAAAGDEGKPVGKDFDFFGQTAQMTNVLGEEQVIYNLKHQKDTPKAS
APLHEPSKPKRTGYEPYQDPGYIPEIQAKSSVWGTGITQKSKPVEQAQAVVAPARKMMSL
EEVEAQMRAQTQRPQPKAEPPASLPSQQFPINASQPMPLNLRAQEAPIPHPDNFAHFQQK
DFPPLSQHQQYPQFGGYGPLPQDLQRQQLRPLQERSRQNAPIQVLQHQNRAMNIPQRPTG
PQVQGHFPQTQPPPNTAGQLPSIAAMHPQFMQLPEEQRKALLAEDAKRAKRNHKIHLLSK
GNGLMTPQDKNFITRIQLQQLVSATGNTGETDHDSLLSEDFYYQVYSQIRGAPRQHPRQP
LGHFAQTYLFQTGNRSGNNSGRRQYQNADNHMQRMQQQVQRAVEAAKLRPKNKQLIIEGS
LGKISFSNAKTPRTLLNIKRPDSADGHKPTNVRKAAHTGLSPSDRKSILHNIESTYDTLM
KMDDHERRMPPTPDAEDAEAVEKHLEWRQKREALNQKLWTDMKVHEPIFPGSPTTHPFIA
FLSYPKGKKAIPRIFRHIDQEQRVTILTMIIVHLDTLDVIQRAQLQPGEIQPPGPVREEI
DLFSQAVMPSLLSYVNEAPLKIIIGLLGLLVFRTNVHAVSKTRIGLGILTMLLSRGELVK
ETGAVEDEELKQWMDLYNKFFDRLEPILGSIFPGSINSGDDIYVWQFLAAVGIGASPEQQ
QRLVIAVKDRVMETVSQSKTLPADMASQRLGNVNLFMRAIGLDVELLG
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgtcgttttttggtttcgataccacgcttcctaacgatcgtcttccgccacaggagtcg
aggggtatcttcgaaaccccagatcctttcgccgaagttgctcgcgccacagcacatggg
ttccatggcgatgacgatgcaattgattttgaggatacctatgatggactgggagaccgc
cttgacgagacccaagatgccttcaacgacgacaccttcggggccgccgcgggggatgag
ggaaagcctgtggggaaagactttgacttcttcggccaaactgcgcagatgaccaatgtt
cttggtgaagagcaagtgatatacaatctgaagcaccaaaaagacacccccaaagcctcg
gcaccgttgcatgagccttcgaagccgaaaaggacgggctacgagccttatcaggatccc
ggatatataccagaaatccaagccaagtcgagtgtctgggggacggggataacgcaaaag
tcaaagccagtagaacaggctcaggcggttgttgctccagcccgaaagatgatgagtttg
gaggaagtcgaagcgcaaatgcgcgcgcagactcagagaccccagcccaaagctgaacct
ccggcttctctcccgtcgcagcagtttcccatcaacgcttcgcaacccatgccactcaac
ctccgtgctcaagaggcccccattcctcatccagacaattttgcacactttcaacaaaag
gactttccgcccttaagtcaacatcagcaatatccgcaattcggcggctacgggccttta
ccgcaagacctccagcggcaacagctgcggcctcttcaggagcggtcaagacaaaacgct
ccaattcaggtccttcagcatcaaaaccgtgccatgaacattcctcagagacctaccgga
cctcaagttcaaggccattttccgcagactcaaccaccgccaaacacagctggccaactt
ccatcgattgccgcgatgcacccacaattcatgcagcttccggaagaacagcgtaaagct
ttgttagcagaagacgccaaacgcgccaaaaggaaccataagatccatcttctttccaaa
ggaaacggattaatgactccgcaagataagaattttattacccgaatccaactacaacag
ctggtatcggcaactggaaatactggggagaccgaccatgactccctcttgtcagaggat
ttctattatcaagtatatagccaaatccgcggtgctcctcggcagcatcctcggcaacct
cttggtcattttgcccaaacctaccttttccaaactgggaaccgctctggcaacaattcg
ggcagaagacagtaccaaaacgcagacaaccatatgcaacggatgcaacaacaagtccag
cgcgctgttgaagcggcgaaactccgccctaaaaataagcagctcataattgaagggagc
ttaggaaagatttcattcagcaacgctaaaaccccgaggacacttcttaatatcaagcgc
cctgacagcgcggacggccataaaccaaccaacgttagaaaggcagctcataccggcttg
agccccagtgatcgaaaatccattttacataacatcgaaagtacatacgataccctaatg
aaaatggatgatcatgaacgcagaatgccacccacaccagatgcagaagacgcggaagct
gttgagaagcatttggagtggagacagaaaagggaggctttgaatcaaaagctatggacg
gatatgaaggtccatgaacccattttccccggatctccaacgacacatccttttattgca
ttcttgtcttaccctaagggcaagaaggctatcccccggattttccgccacattgatcag
gaacagcgggtaacaatcctcactatgatcattgtccatttggacaccttggatgtgata
cagcgggctcaattacagccaggagaaatccaacctcctggcccagtccgtgaagagatt
gacttgttttcacaagctgttatgccgagtttgttaagttacgtcaacgaagctcctctc
aagatcattattggattactcggcctccttgtcttccgtacaaacgttcacgcagtttcc
aaaacgcggatcggcctcggcatcctgaccatgttgttgagccgtggagagttggttaaa
gaaacgggcgcagtggaggatgaagaattgaaacaatggatggacttgtataacaagttc
tttgaccgcctggagccaattctgggcagcattttccctggctccatcaatagcggcgac
gatatatacgtgtggcaattccttgcagccgttggcattggagcaagcccagaacagcag
caacggctagtaattgctgttaaggaccgagttatggaaactgtctctcagagcaaaaca
ttgccagctgatatggcgagtcagcgactgggtaatgtcaacctgttcatgcgtgctatt
ggacttgatgttgagcttttgggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system