KEGG   Uncinocarpus reesii: UREG_03864
Entry
UREG_03864        CDS       T01132                                 
Name
(RefSeq) similar to transcription initiation factor tfiid 60 kd subu nit
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
ure  Uncinocarpus reesii
Pathway
ure03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    UREG_03864
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ure03021]
    UREG_03864
   03036 Chromosome and associated proteins [BR:ure03036]
    UREG_03864
Transcription machinery [BR:ure03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     UREG_03864
   Coactivators
    SAGA/TFTC/STAGA complex
     UREG_03864
Chromosome and associated proteins [BR:ure03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     UREG_03864
    STAGA complex
     UREG_03864
    TFTC complex
     UREG_03864
    SAGA complex
     UREG_03864
    SLIK complex
     UREG_03864
SSDB
Motif
Pfam: TAF6_C TAF TFIID-31kDa Histone Bromo_TP
Other DBs
NCBI-GeneID: 8441461
NCBI-ProteinID: XP_002544347
UniProt: C4JM06
AA seq 446 aa
MLVWNPDNIKDVAESVGINALNDEVVDHLARDVEYRVSQVLEESHKFMRHGKRTLLTTQD
VSNALRVLDVEPLYGYESTRPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREI
TFTAHWLAVEGVQPTIPQNPTSADSRNLELISKGPNANANLAAMSGNENVTVKPLVKHIL
SKELQLYFERVCSAFLDESNEEYRLSAFASLKEDPGLHQLVPYFVQFISEKVTHSLKDLF
VLTQMMHMTEALIQNKSLYVDPYVASLIPPVLTCLIGRQLEGGSDPLEHFTLRDLAGSLI
GMISKKYSHSSHTLKPRLARTFLKNFMDPSKPFGTHYGAIIGLHSIGGPDVIRELIVPNL
AMYEVVLKDAAGDEGLRKLEAEKVIGVIVAALSTLQDEKAPLTNGLANGAMETLNQQLGE
KIGLVLASRITDSGNLRLAQAIIGKL
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgctcgtgtggaatcccgataatatcaaagatgtcgcagaatccgtcggtatcaacgcc
ctgaatgacgaggttgttgatcaccttgcgcgagacgttgagtaccgcgtctctcaggtt
cttgaagaatcgcataagtttatgaggcatgggaaacgcacattgcttacaacgcaagac
gtctcgaacgcgctcagagtacttgacgttgaaccgctgtatggctacgagtctactcgg
cctctgagatttggagaagctacaatcggacccggacagcccctgttttatgttgaggac
gacgaggtggattttgagaagttgatcaatgcacccctaccgaaggtgccgagggagatt
actttcactgctcactggttggctgtggaaggtgttcaaccgacaatccctcagaacccc
acgtccgccgattcacgcaacctggaactgatttccaagggacctaatgcgaacgccaat
ctggccgccatgagcgggaacgagaatgtgacggtgaagccgctggtgaagcacattctg
tcaaaggaattgcaactatactttgagagggtgtgcagtgcattcttggatgagtcgaac
gaggagtaccgcctatcagcctttgcgagcttaaaggaagaccccgggttgcaccaactc
gttccgtattttgtgcagtttatatctgaaaaggtaacgcatagcttgaaggatctgttt
gtgttgacgcagatgatgcatatgaccgaagcgttgatacagaacaagtcattatacgtc
gacccatatgtcgcctctctcattccgccagttttaacctgccttattggccgccaactt
gaaggtggctcggatcctctggagcattttacacttcgcgatctggcgggctcacttatc
ggaatgatttctaagaaatattcgcactcgtcacacactctcaaacctcgactagcgcga
acattcctgaagaatttcatggatcccagtaaaccgtttggcacacactatggtgccatt
atcggactacattcaatcggagggcccgacgttattcgcgaattgattgtgcctaatctt
gcaatgtacgaggtggtactgaaggacgctgctggggacgaaggcctccgaaaactagag
gcggaaaaggttatcggggtcatagtcgcagctctttcaacgcttcaagatgagaaagcg
cctcttacaaacgggcttgcgaatggagccatggagacactaaatcagcagctaggggag
aagattggcttggtgctggcttcccggattacagactccggtaacttgcgactcgcccaa
gctattattgggaagctctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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