KEGG   Variovorax sp. PAMC 28711: AX767_00945
Entry
AX767_00945       CDS       T04325                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vaa  Variovorax sp. PAMC 28711
Pathway
vaa03030  DNA replication
vaa03430  Mismatch repair
vaa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AX767_00945
   03430 Mismatch repair
    AX767_00945
   03440 Homologous recombination
    AX767_00945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vaa03032]
    AX767_00945
   03400 DNA repair and recombination proteins [BR:vaa03400]
    AX767_00945
Enzymes [BR:vaa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AX767_00945
DNA replication proteins [BR:vaa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AX767_00945
DNA repair and recombination proteins [BR:vaa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AX767_00945
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AMM23092
UniProt: A0A126ZCB9
Position
complement(171896..172597)
AA seq 233 aa
MRQIVLDTETTGLSAENGDRVIELGCVELFNRKLTGNDFHVYFNPGRESHEDALKVHGLT
TDFLRDKPKFATLANDVVEYLRGAELIIHNAAFDVGFLNKELELAGLPPLRTFVDEVTDT
LAMAKLVYPGKRNSLDALCDRFGVDRSNRTFHGAKLDAQLLADVYINLTRGQDALLIEVA
SNEPAIGTVVAVDLSRFELPVLAATDHEMVAHEALLAQLDKSSNGRTLFRVGV
NT seq 702 nt   +upstreamnt  +downstreamnt
atgcgccaaattgttctcgacaccgaaaccacgggtctctccgccgaaaacggcgaccgc
gtcatcgagttgggttgcgtcgagctgttcaaccgcaagctcaccggcaacgacttccac
gtctacttcaatcccgggcgcgaaagccatgaagatgcgctgaaggtgcacgggctcacc
accgactttctgcgcgacaagccgaagttcgccacgctcgcgaacgatgtcgtcgagtac
cttcgcggcgccgagctgatcattcacaacgccgccttcgacgtgggttttctcaacaag
gaactggaactggccggtcttccgccattgcgcacgttcgtcgacgaagtgaccgacacg
ctggccatggccaagctggtgtaccccggcaagcgcaactcgctcgatgcgttgtgcgac
cgcttcggcgtggaccggtcgaaccgcacatttcacggcgccaagctcgatgcgcagctg
ctggccgacgtctatatcaacctcacgcgcggccaggacgccttgctgatcgaggtggcg
tccaacgaaccggcgatcggcaccgtcgttgccgtcgacctgagccgcttcgaattgccg
gtgctggcggcgaccgaccatgaaatggtggcgcacgaggcgttgctcgcgcagctcgac
aaatccagcaatggccggacgctttttcgcgtgggtgtctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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