KEGG   Variovorax sp. PAMC 28711: AX767_02905
Entry
AX767_02905       CDS       T04325                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
vaa  Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:vaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vaa03009]
    AX767_02905
   03016 Transfer RNA biogenesis [BR:vaa03016]
    AX767_02905
Enzymes [BR:vaa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     AX767_02905
    5.4.99.29  23S rRNA pseudouridine746 synthase
     AX767_02905
Ribosome biogenesis [BR:vaa03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AX767_02905
Transfer RNA biogenesis [BR:vaa03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    AX767_02905
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AMM23426
UniProt: A0A126Z8T8
Position
558799..559437
AA seq 212 aa
MTVLHALHDDAHLLVFDKPAGLLCVPGRGDDKQDCLSARAQRQWPDALIVHRLDMATSGL
VVMARSIAVQRALGDAFARREVHKRYEAIVDGRVPCNDAWSEIDAPLMADWPNRPRQKID
PAGKPSVTRWMAVAPSAAGGATHVLLEPVTGRTHQLRVHLHSIGHAILGDALYGDAPVQA
RATRLLLHATALAFVHPVTGEPMRFESAAPFD
NT seq 639 nt   +upstreamnt  +downstreamnt
atgacggtcttgcacgcactccacgacgatgcgcacctgctggtgttcgataagcccgcg
ggcctgctgtgcgtgcccgggcgcggcgacgacaagcaggactgcctcagcgcacgcgcg
caacggcaatggcccgacgcgttgatcgtgcaccgtctcgacatggcgaccagcggcctg
gtggtgatggcacgcagcatcgcggtccagcgggcgctcggcgacgccttcgcgcgtcgc
gaggtccacaagcgctacgaggccatcgtcgacgggcgggtgccgtgcaacgacgcgtgg
tcggagatcgatgcgccactgatggccgattggccgaaccgtccgcggcaaaagatcgac
ccggcgggcaagccgagcgtcacgcgctggatggcggtggcgccaagcgccgcgggcggc
gccacgcatgtgctgctggaacctgtcacggggcggacgcaccagttgcgcgttcacttg
cactccatcggccacgcgatcctcggagatgcgctgtacggcgatgcacccgtccaagcg
cgcgcgacgaggctgctgttgcacgccaccgcactggcgttcgtgcatccggtcacgggt
gagccgatgcgcttcgagagcgctgcgccgttcgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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