KEGG T04325: AX767

Variovorax sp. PAMC 28711: AX767_06990

Entry

AX767_06990       CDS       T04325

Name

(GenBank) 23S rRNA methyltransferase

K06969

23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]

Organism

vaa Variovorax sp. PAMC 28711

Brite

KEGG Orthology (KO) [BR:vaa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vaa03009]
    AX767_06990
Enzymes [BR:vaa01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     AX767_06990
Ribosome biogenesis [BR:vaa03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AX767_06990

SSDB

Motif

Pfam:

PUA_3 Methyltrans_SAM Methyltransf_31 MTS Methyltransf_25 Cons_hypoth95

Other DBs

NCBI-ProteinID:

AMM24122

UniProt:

A0A126ZF98

Position

complement(1401403..1402605)

AA seq 400 aa
MKTLRLKPGKEKSLLRRHPWVFESAIARGGADSGETVRVESHDGEFLAWAAFSPTSQIRA
RAWSFVEPQRIDAAFLAALCTRAVDARRYFDLQSDGIRLVHGEADGLPGLIVDRYGDTLV
AQFGAAGVERWKDVLADALLAATGLTQLYERSDASGREREGLKPVTGWLRGDGPTEIAIR
EHDWQLTLDIATGHKTGFYLDQRDSRKRFAEIAQHRRFRRLLNCFCYTGGFTVAALAGLK
AAGALEGATLTSIDSSLLALERAKAHVALNGFESVACDFLDADVNASLRRFIEEGRTFDA
IVLDPPKFAPTAAHAERAARAYKDINRLALKLLEPGGVLFTFSCSGGIGADLFHKIVAGA
GLDAGVDGYISERLGAAPDHPMTIEFPEGEYLKGLVVVRK

NT seq 1203 nt +upstreamnt +downstreamnt
atgaaaaccctccgcctcaagcccggcaaggaaaaatccctgctgcgacgccatccctgg
gtcttcgaatccgccatcgcacgcggtggcgccgattccggcgaaacggtgcgcgtggaa
tcgcacgacggcgagttcctggcgtgggcggcgttcagcccgacgtcgcagattcgtgcg
cgtgcatggagcttcgtcgagccgcagcgcatcgacgcggcgtttctcgcggcgctctgc
acgcgcgctgtcgacgcgcggcggtatttcgacctgcagagcgacggcatccgcctcgtg
cacggcgaggccgacgggctgccggggctgatcgtcgaccgctacggcgacacgctggtc
gcgcaattcggcgctgccggcgtcgagcgctggaaagacgtgctggccgatgcgctgctg
gccgcgaccgggctcacgcagctctacgaacgctccgatgcgagcgggcgcgagcgcgaa
gggctgaagccggtcaccggctggctgcgcggggacgggccgaccgagatcgcgatccgc
gagcacgactggcagctcacgctcgacatcgcgaccggccacaagaccggcttctacctc
gaccagcgcgacagccgcaagcgcttcgccgagatcgcacagcaccgccgatttcgccgc
ttgctcaactgcttttgctacaccggcggcttcacggtcgcggcgctcgcggggctcaag
gcggccggcgcgctcgaaggcgcgacgctgacgtcgatcgattcgtcgctgctcgcgctg
gagcgcgcgaaagcgcacgtcgcactcaacgggttcgagagcgttgcctgcgattttctc
gatgcggatgtcaacgcatctctgcgccgcttcatcgaagaaggccgcaccttcgacgcg
atcgtgctcgacccgccgaagttcgcgcccacggcagcgcatgccgagcgcgccgcgcgc
gcctacaaggacatcaaccgcctcgcgctcaagctgctggagccgggcggcgtgctgttc
acgttcagctgctcgggcggcatcggtgccgacctgttccacaagatcgtggccggtgcg
gggctggatgcgggcgtcgacggctacatcagcgaacggctcggcgccgcgcccgaccac
ccgatgaccatcgaatttcccgaaggagagtacttgaaggggctggtggtcgtgcgcaaa
taa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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