KEGG   Variovorax sp. PAMC 28711: AX767_08370
Entry
AX767_08370       CDS       T04325                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
vaa  Variovorax sp. PAMC 28711
Pathway
vaa00061  Fatty acid biosynthesis
vaa00071  Fatty acid degradation
vaa01100  Metabolic pathways
vaa01212  Fatty acid metabolism
vaa02024  Quorum sensing
Module
vaa_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vaa00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    AX767_08370
   00071 Fatty acid degradation
    AX767_08370
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AX767_08370
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vaa01004]
    AX767_08370
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vaa04147]
    AX767_08370
Enzymes [BR:vaa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     AX767_08370
Lipid biosynthesis proteins [BR:vaa01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   AX767_08370
Exosome [BR:vaa04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   AX767_08370
  Exosomal proteins of breast cancer cells
   AX767_08370
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: AMM24362
UniProt: A0A126ZFY4
Position
complement(1676101..1677720)
AA seq 539 aa
METKKLPERPQQPLHAYLRRHARERGAQPACIWYGRTLSWAELDAASDAFAARLQAIGVK
KGEPVVLFLNNCPQYIVAHFGIQKIGAIVCPSGPLNKEHELAYQVNDLRARVIVAAAPLM
SVVRRVQPESSIAHVFVVHYADLLPETPALDLPAELAADQRAERHVPDGCEDFLAVMSSD
AKPSAVEFDLDDVALMTYTSGTTGLPKGAMLSYGNALYKTRCAADCNGVTEADVLLSIAP
LYHIAGMLMGVNVPVLTGAASVLLHRFDPRVALQAIDRFKVSWWYSIAPMNVACMQVPDI
ARFDLSSLRMNPVTSFGIAFTEPLAAQWQSHAKNCASFEAAYGLSETHTCDTYTPRDAPR
WGTQGIPAPGVQIRIVDADTGVDKPTGEVGEIILTSAGTFKGYWNKPEATAATLRNGWVH
TGDMGKLDADGYLTFIGRFKEMIKVSGYSVFPEEVETMLIKHPAVAQAAVIAQPDADKGE
VVKAFIVKKPGAALEAAALIAWSRDNMAPYKVPRAVSFIDALPATGAGKVLRRLLKDKD
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggagacaaaaaaactgcccgaacggccgcagcaacccctgcacgcgtacttgcggcgc
cacgcgcgcgaacgcggcgcacagccagcctgcatctggtacggacgcacgctgagttgg
gccgaactcgatgccgcgagcgatgccttcgcggcacgcctgcaggcgatcggcgtcaag
aaaggggagccggtcgtgctcttcctgaacaactgcccgcagtacatcgtcgcgcacttc
ggcatccagaagatcggcgccatcgtgtgcccgagtggaccgctcaacaaggagcacgaa
ctggcctaccaggtcaacgacctgagggctcgcgtcatcgtcgcggcggccccgttgatg
tccgtggtgcgcagggtgcagcccgagagctcgatcgcgcatgtgttcgtcgtgcactac
gccgacctgttgcccgagacgccggcactcgacctcccggcggagcttgccgccgaccag
agggctgaacgccacgtgcccgacggctgcgaggacttcctggcggtgatgtcgagcgac
gcgaagccctcggccgtggagttcgacctcgacgacgtggcgctcatgacctacacctcg
ggcaccaccggcctgcccaagggcgcaatgctgagctacggcaacgcgctctacaagacg
cgctgcgccgccgattgcaacggcgtgaccgaggccgatgtgttgctgtccatcgcgccg
ctgtatcacatcgccggcatgttgatgggcgtgaacgtgcccgtgctcaccggcgccgcg
tcggtgctgctgcaccgcttcgacccgcgcgtggcgctgcaggccatcgaccgcttcaag
gtgagctggtggtacagcatcgcgccgatgaacgtcgcgtgcatgcaggtgcccgacatc
gcgcgcttcgatctgtcgagcctccggatgaacccggtgacgagcttcggcatcgccttc
accgagccgctggcggcgcagtggcagtcgcacgcgaagaactgtgcgtctttcgaggcg
gcttacggcctgagcgaaacccacacctgcgacacctacacgccacgcgatgcgccgcgc
tggggcacgcagggcatccccgcacccggcgtgcagatccgcatcgtcgatgccgacacc
ggcgtggacaaaccgaccggcgaagtcggcgaaatcatcctcaccagcgcgggtaccttc
aagggctactggaacaagcccgaggccacggcggcgaccctgcgcaacggctgggtgcac
accggcgacatgggcaagctcgatgccgacggctatctcaccttcatcggtcgcttcaag
gaaatgatcaaagtgtcgggctacagcgtgttccccgaagaagtcgagacgatgctcatc
aagcacccggcggtggcgcaggcggccgtcatcgcgcaacccgacgccgacaagggcgag
gtggtcaaggccttcatcgtgaagaagcccggtgccgcgctcgaggccgctgcgctcatc
gcctggtcgcgcgacaacatggcgccctacaaggtgccgcgcgccgtcagtttcatcgat
gcgttgcccgccaccggcgccggcaaggtgctgcgtcgcctgctcaaagacaaggactag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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