KEGG   Variovorax sp. PAMC 28711: AX767_13865
Entry
AX767_13865       CDS       T04325                                 
Name
(GenBank) ribonuclease H
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
vaa  Variovorax sp. PAMC 28711
Pathway
vaa03030  DNA replication
Brite
KEGG Orthology (KO) [BR:vaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AX767_13865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vaa03032]
    AX767_13865
Enzymes [BR:vaa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     AX767_13865
DNA replication proteins [BR:vaa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    AX767_13865
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     AX767_13865
   Elongation factors (archaeal)
     AX767_13865
SSDB
Motif
Pfam: RVT_3 RNase_H CHASE8
Other DBs
NCBI-ProteinID: AMM25325
UniProt: A0A126ZFW5
Position
complement(2860232..2860696)
AA seq 154 aa
MSAPAPAAAGEWTVFCDGSAVPNPGRMGLGAVITAPDGARQTLSVATHAIGCNNEAELRA
LIAALQALNAQGATAVRAFSDNSVLVAQLAAVPAKPVVRLAALFDEARTLLHSFERAEVQ
WIPRHRNGEADALARAALGIPPKPPAKWAKKHRR
NT seq 465 nt   +upstreamnt  +downstreamnt
atgagcgcgcccgcgccggcggccgctggcgaatggaccgtcttctgtgacggcagcgcg
gttcccaatccgggacgcatgggcctcggcgccgtcatcaccgcgccggacggcgcgcgc
cagacgctttccgtcgccacgcacgccatcggctgcaacaacgaagccgaactgcgcgca
ctgatcgcggcactgcaggcgctcaacgcccagggcgcgaccgccgtgcgggcgttcagc
gacaacagcgtgctggtcgcgcagctcgccgccgtgccggcgaaaccggtcgtgcgcctg
gccgcgctcttcgacgaagcgcgcacgctgctgcacagcttcgagcgcgccgaggtgcag
tggatcccgcgtcatcgcaacggcgaggccgacgccctcgcacgcgccgcgctcggtatc
ccaccaaaaccccctgccaaatgggccaaaaaacatcgacgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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