KEGG   Variovorax sp. PAMC 28711: AX767_15210
Entry
AX767_15210       CDS       T04325                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
vaa  Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:vaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vaa03016]
    AX767_15210
Enzymes [BR:vaa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     AX767_15210
Transfer RNA biogenesis [BR:vaa03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AX767_15210
 Prokaryotic type
    AX767_15210
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AMM25556
UniProt: A0A126ZF15
Position
complement(3137112..3137924)
AA seq 270 aa
MRLALGIRYNGQAYEGWQSQRSGRTVQDKLESALGKFADRPISTLCAGRTDAGVHGLMQV
IHFDTDIARETISWVRGTNRFLPPDIAVQWAQPVPDAFHCRASALARRYLYVLSQSPVRP
SLDAGRVGWSMYPLDGDSMRVAAALLIGQHDFSSFRASACQARSPVKDVRRIAITRHGEG
DRCRWHFEFEADAFLHHMIRNLMGCLVRIGRGDAPPEWIAEVLAARSRKVAAPTFSAAGL
YFRGPQYDAQWGLPPEATLGHAGAPYDGPP
NT seq 813 nt   +upstreamnt  +downstreamnt
gtgaggctggccctcggcattcgctacaacgggcaggcctacgagggctggcagagccag
cgctcgggccgcaccgtgcaggacaaactggaatcggccctcggcaagttcgccgaccgg
ccgatttcgactttgtgcgcaggccgaaccgatgctggcgtgcacggcctcatgcaggtc
atccacttcgacacggacatcgcgcgcgaaaccatctcctgggtgcgcggcaccaaccgt
ttcctgccgcctgacatcgccgttcagtgggcgcagccggtgcccgacgcgttccactgc
cgcgccagcgcgctggcgcgccgctatctctacgtgctgtcacagtcgccggtgcgcccc
agtctcgacgccggccgcgtcggctggtcgatgtatccactcgacggcgattcgatgcgc
gtggccgccgccctcctcatcggccagcacgacttcagttcgttccgggcgtccgcctgc
caggcccgctcgccggtgaaggacgtgcgccgcatcgcgatcacgcgccacggcgagggc
gaccgatgccgctggcacttcgagttcgaggccgatgctttcctgcaccacatgatccgc
aacctgatgggctgtctggtgcgcatcggccgcggcgacgcgccgcccgaatggattgcc
gaggtgcttgctgcgcgcagccgcaaagtggcggcaccgaccttctccgcagccggtttg
tatttccgcggcccgcagtacgacgcgcagtggggtctgccgccggaagcaacgctgggt
cacgcaggcgctccgtatgatggcccgccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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