KEGG   Vagococcus xieshaowenii: E4Z98_03875
Entry
E4Z98_03875       CDS       T05932                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
vac  Vagococcus xieshaowenii
Pathway
vac03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    E4Z98_03875 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vac03400]
    E4Z98_03875 (uvrA)
DNA repair and recombination proteins [BR:vac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E4Z98_03875 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      E4Z98_03875 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_21 RsgA_GTPase nSTAND1 AAA_29 BCA_ABC_TP_C AAA_22 AAA_33 nSTAND3 AAA_23 DnaJ_CXXCXGXG AAA_25 AAA_18 ATPase AAA_14 NACHT MMR_HSR1 Viral_helicase1 NB-ARC cobW RNA_helicase Septin MeaB NTPase_1 Dynamin_N DUF87
Other DBs
NCBI-ProteinID: QCA28493
UniProt: A0A4Z0DCW3
Position
797672..800491
AA seq 939 aa
MANDKLVIRGARAHNLKNIDVTIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGVP
VCPNDGTVIESQSVEQMVDRVLTLEERSKVQILAPIVVGKKGQHKKILEKVKKEGYVRVR
IDGEIYDISELPELDKNKKHTIEIIVDRIVVKEGIRSRLFDSFEAALRLADGYAIADVMG
VEELLFSEHYACPYCGFTVGEVEPRLFSFNAPFGACSECDGLGVKMEVDPDLVVPDTSKT
LEEGAIAPWNPISSNYYPTLLRQACETFGIPMDQPFETLSVEQKQLIFYGSGDKQFHFHY
QNDFGGVRDVDMTFEGILTNIDRRFRESSSDYTREQMRLYMTELPCQSCHGYRLNPQALS
VKVGGKHIGELSSLAINDSLAFIRSIELSEKNQMIARPIFKELNDRLTFLINVGLDYLNL
SRASGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLRQMRDLGNT
LIVVEHDEDTMMAADYLIDIGPGAGDAGGQIVAAGTPEEVMNNDASLTGQYLAGKREIKV
PEERRKGNGQVVTVHGATENNLKNITVDFPMGKFVAVTGVSGSGKSTLVNGILKKSLAQK
INRNTHKPGKHKKITGYEGIERLVDIDQSPIGRTPRSNPATYTSVFDDIRDLFTKTNEAK
IRGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCHGHRYNSETLEVRYKG
KNIADVLEMRVEEAVEFFQTIPKIKRKLQTIVDVGLGYVTLGQPATTLSGGEAQRMKLAS
ELHKRQTGSSFYILDEPTTGLHSEDIRRLLEVLQRLVDAGNTVLVIEHNLDVIKTADHVI
DLGPEGGAGGGMVIAEGTPEEIMQVKESFTGYYLKKVLK
NT seq 2820 nt   +upstreamnt  +downstreamnt
gtggcaaatgacaaacttgtaattcgtggggcacgtgcccataatttgaaaaatatagat
gtcaccataccaagagacaaattagtggtggtgaccggtctttctggttcagggaaaagc
tcgttagcgtttgatacgatttatgccgaaggacaacgacgttatgttgaaagtctctct
tcatatgcacgtcaatttttaggacaaatggataagcccgatgtagatagcattgacggt
ctgagtccagcaatatcgattgatcaaaagacaacgagtaaaaacccacgttcaacagtg
gggacagtgacagaaattaatgattatttacgtttactttatgcccgtgtaggtgtacct
gtttgtcctaatgatgggacagtgatcgaaagtcaatccgttgaacaaatggtggatcgt
gtcttaactcttgaagaacgtagcaaagttcaaatattggcacctattgttgtaggaaaa
aaaggccaacataaaaaaattcttgaaaaagtaaaaaaagaaggatatgttcgcgttaga
attgacggcgaaatatatgatataagtgaacttcctgagttagataagaacaagaaacat
accatagaaattattgtcgataggattgtggtaaaagaaggtattcgctctcgtctattt
gattcgtttgaagcagcgttgcgattagcagatggttatgctattgctgatgtaatgggg
gttgaagagctattatttagtgaacactacgcatgtccttattgtggatttactgttgga
gaagttgaacccagattattttcttttaatgcaccatttggagcgtgtagtgagtgtgat
ggtttaggcgtcaaaatggaagtcgatccagatttggttgtgccagatacaagcaaaacc
ttggaagaaggggcaattgcaccttggaatcccattagttctaattattatccgacttta
ttaagacaggcgtgtgagacgtttggaattccaatggatcaaccttttgaaacattaagt
gtcgaacaaaaacaattgatattttatgggtcaggggataagcagtttcatttccattac
caaaatgactttggtggggttcgggatgtcgatatgacatttgaagggattttgaccaat
attgatcgtcgtttccgagaatcttcaagtgattacacacgcgaacaaatgcgattatat
atgacggagttaccttgtcaaagctgtcatggctaccgactaaatccacaagctttatcc
gttaaagttggcggtaagcatattggcgaattaagttcattagcaattaatgattcgctg
gcgtttattcgttcaattgagttatctgaaaaaaatcaaatgattgcacgtccaattttt
aaggaattaaatgatcgcttgacgttcttaataaatgtcggcctagattatttgaattta
agtcgggcttcggggacactttccggtggagaagcacaacgtattcgtctagcaacccaa
attggttctaatttatcaggcgttctttatatcctagatgagccttcgataggtcttcat
caacgtgataatgatcgcttaatcgagtcgttacgacaaatgcgagatttggggaatacg
ttaattgttgtagagcatgatgaggatacgatgatggccgcggactatttgattgatatt
ggtccaggagcaggagatgccggtggacaaattgtagcagctggaacacctgaagaagtg
atgaataatgatgcttctttaacgggacaatatttggcaggtaaacgagaaatcaaggtg
cctgaagagcgtcgcaaaggtaatggtcaagtggttaccgtacacggagcaacagaaaat
aatttgaaaaatattacggttgattttccaatggggaaattcgtggctgtaacaggagta
tctggttcaggtaagagtacgcttgttaatggtattctgaagaaaagtctcgcacaaaaa
ataaaccgaaatacgcataaaccgggtaaacataagaagataaccgggtatgaggggatt
gaacgtttagtcgatatcgaccaaagcccaatcggacgtacgccaagaagtaacccggca
acttatacgagtgtgtttgatgatattcgtgatttgttcactaaaacgaacgaagctaaa
attcgtggctataagaaaggtcgctttagttttaatgtgaaaggtggacgctgtgaagct
tgtaaaggcgatgggattattaaaattgaaatgcactttttaccagatgtttatgttcct
tgtgaagtttgtcatggacatcgttataactctgaaacattagaagttcgttataaaggt
aaaaatattgcggatgttttggaaatgcgagtagaagaagcagtagagtttttccaaact
attcctaaaataaagcgtaagctacaaacaattgtagatgtgggcttaggatatgtaaca
ctaggacaacctgctacaactctttccggtggagaagcacaacgtatgaaactcgctagt
gaactacataaacgtcaaacaggttcgagcttttatattttagatgagccaacaacaggt
cttcattctgaagatattcgtcgattattagaagtgctacaacgtttagttgacgccggt
aataccgtattagttatagaacataacttggatgttataaagacagccgatcatgtaatt
gatttaggtccagaaggtggcgctggtggtggcatggtaatcgctgaaggcacccctgaa
gaaattatgcaagtgaaagaaagttttacagggtattatttaaaaaaagtattgaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system