KEGG   Vibrio alfacsensis: D1115_12790
Entry
D1115_12790       CDS       T05841                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
vaf  Vibrio alfacsensis
Pathway
vaf00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vaf00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    D1115_12790 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vaf01007]
    D1115_12790 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vaf03016]
    D1115_12790 (lysS)
Enzymes [BR:vaf01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     D1115_12790 (lysS)
Amino acid related enzymes [BR:vaf01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   D1115_12790 (lysS)
Transfer RNA biogenesis [BR:vaf03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    D1115_12790 (lysS)
 Prokaryotic type
   Other AARSs
    D1115_12790 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AXY01882
UniProt: A0A347USQ3
Position
I:complement(2621809..2623341)
AA seq 510 aa
MTDAVQNETVQEASTQEENKLIAERRAKLDAIRKSCKANGHPNDFRRDALAGDLQKEFGE
KTKEELEELNHVVAIAGRIMAKRGPFLVIQETSGRIQAYADKEVQKVLKDQYQGLDIGDI
IGVKGALHKSGKGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSR
NAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPE
LYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSV
ALEVLGSTSMPYGEDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIA
KSVHVEVESFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFE
FFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQ
GIGIDRLVMLLTNTHTIRDVILFPAMRPQA
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgactgatgctgttcaaaacgaaactgtacaagaagcctctacacaagaagagaataag
ctgattgctgagcgccgcgctaaactggatgcaatccgaaagagctgcaaagcaaacggc
cacccaaacgacttccgtcgtgacgcactcgcgggcgaccttcaaaaagagttcggtgaa
aagactaaggaagagctagaagagcttaaccacgtagtagcaattgctggccgtattatg
gctaagcgtggtccattcctagtgattcaagaaacgtctggccgcatccaagcttacgct
gacaaagaagtacagaaagtactgaaagatcaataccaaggtctagatatcggtgacatc
atcggtgttaaaggtgcgctacacaaatctggtaagggcgacctatacgtgaacatggaa
gagtacgagttgctaaccaaagctcttcgtccactaccagagaagttccacggtctaact
gaccaagagatgcgttaccgtcaacgttacgtagatctgatcgttaacgaagattctcgt
aatgcattcgtagttcgttctaaagtgatgtctgcaatccgtaacttcatgatctctaag
cagttcatggaagttgaaacgccaatgatgcacgttatccctggcggtgcgagtgcgcgt
ccatttatcacgcaccacaatgcgctagacatgccaatgtacttacgtatcgcgccagaa
ctatacctaaaacgtctagttgttggtggtttcgatcgtgtattcgaaattaaccgtaac
ttccgtaacgaaggtctttctccacgtcacaaccctgaattcactatgatggaattctac
atggcgtacgcggattacaaagatctgatggatctaactgaagaactactaagttcagtc
gctctagaagtacttggttctacatcaatgccttacggtgaagatactgtagaatttggc
ggcacttacacgcgtatgagcatgtttgaagcaatcaaacactacaaccctgaccatgcg
caaattcaagcgctaacagaagaagatattcaaaaccgtgacctaatggtttctatcgcg
aaatctgttcacgttgaagtagaatctttctggacatgtggtcagcttcttgaagaaatc
ttcggtgaaactgctgaacctaagctaatgcagccaacgttcatcactggctacccagcg
gacatctctccactggctcgtcgtagcgatgataatccattcttcacagaccgctttgag
ttcttcatcggtggccgtgaagtagcgaacggtttctctgagcttaacgatgcagaagac
caagatgcgcgctttaaagcacaggttgaagcgaaagagtctggcgatgatgaagcaatg
ttctacgatgcagactacatcactgcactagagcacggcctaccgccaacagcaggtcaa
ggtatcggtatcgaccgtttagttatgctattgactaacacgcacactatccgtgacgta
attctgttcccagcaatgcgtccacaagcgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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