KEGG   Vibrio alginolyticus: N646_0338
Entry
N646_0338         CDS       T02840                                 
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
vag  Vibrio alginolyticus
Pathway
vag03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    N646_0338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vag03400]
    N646_0338
Enzymes [BR:vag01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     N646_0338
DNA repair and recombination proteins [BR:vag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     N646_0338
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     N646_0338
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      N646_0338
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AGV16171
UniProt: A0A2I3BZN6
Position
1:complement(377287..378708)
AA seq 473 aa
MHQDNQPTFFFFDYETWGTNPAKDRPSQFAGVRTDENFNIIGEPLVMYCQPPADYLPSPE
AALITGITPQKTVQEGLSEPEFIAKIHTELARPNTTSLGYNSIRFDDEVTRYTCYRNFID
PYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEDGFTSFKLEHLSVANGIEHSNAHD
AMADVVATIEMAKKVKAAQPKLFDYFFSMRQKRKLNDLVDIVNMTPLMHVSGMLGRECQY
TSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELHERLYTKREDLGELLPVPVKLVH
LNKCPILAPAKTLTAENAESIGIDRQQCLANLALLRQHPEIREKLISLFSVERKFDKSDD
VDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFRYRARNFPGTLDEQ
EQRRWALHCREVFESQIEEYMLNLENLVHEHESDEKKIAILKSVYRYVESLAS
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgcaccaagataatcagcccacttttttcttctttgattatgagacatggggaaccaac
cccgcgaaagatcgcccaagccagtttgctggtgttcgtacagatgaaaactttaatatc
atcggcgagcctttagtcatgtactgtcaaccaccggctgattatcttccgtctcctgaa
gctgcgcttattactggtattactccgcaaaaaacggttcaagaaggcctttctgagcca
gagtttatcgctaagattcacactgaactcgcgagaccaaataccaccagtttaggctac
aacagcattcgctttgatgacgaagtgacccgttatacttgttatcgcaactttatcgat
ccatacgcatggagttggcaaaacggtaactcacgttgggatttactcgatgtactacgc
gcttgccatgcccttcgcccagaaggcgtagaatggccagaaaacgaagatggcttcact
agctttaaattagaacacttgtctgtggctaacggcatagaacatagtaacgcgcacgat
gccatggcagatgtggttgcgactatcgaaatggcaaagaaagtaaaagcagcgcaacca
aaattgtttgattactttttttctatgcgccaaaagcgcaagctcaatgatttagtcgac
atcgtcaacatgacaccgttgatgcacgtttcaggcatgctagggcgcgaatgtcagtac
actagctggattgtgcctgttgcttggcatccaaccaataataacgccgttatcaccatc
gatttagcgaaagaccctcaacctattcttgagctatccgcagaagagctgcacgaaaga
ctctacacgaagcgcgaagatcttggtgaattgctaccagtgccagttaaactagttcat
ttgaacaaatgccctattctcgcccctgcaaaaacgttaacggctgaaaatgcagagtct
attggcattgatcgccaacaatgtctcgccaatctcgctttgttgcgccaacatcctgaa
attagagaaaagctgattagcctcttttccgtcgagcgtaaattcgataaaagtgatgac
gtcgatacacagctttacgacgggttcttttctccggctgatcgcgcagctatggatatc
attcgagaaaccgacccgaataatcttgctgcattagacattgaatttgatgacaagcgt
attaaacctctattgttccgctatcgtgcgcgtaacttcccaggcacattagacgagcaa
gaacaaagacgctgggcactacactgtcgagaagtgtttgaaagccaaattgaagagtac
atgctgaatttagaaaacttagttcacgaacatgaaagtgacgaaaagaagattgcgata
ttaaaatccgtgtaccgttatgtagagagcttagcttcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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